HIV Target gene Detail Information

> LOC105373133 Gene Search Result


Gene Information
Gene Name LOC105373133
Gene ID 105373133
Gene Full Name -
Gene Alias -
Transcripts ENSG00000289596
Virus HIV
Gene Type ncRNA
Target gene [LOC105373133] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
4001068 chrX 100 76 45 221 View
4001432 chrX 50 81 35 166 View
4011639 chrX 1 5 0 6 View

Target gene [LOC105373133] related to Omics data
Data ID Experiment type Sample number Platform
C
  GSE220859 		Chip-seq 11 Illumina NovaSeq 6000 (Homo sapiens)
C
  GSE211651 		Chip-seq;RNA-seq;PRO-seq 39 Illumina NextSeq 500 (Homo sapiens);Illumina NovaSeq 6000 (Homo sapiens)
GSE162914 RNA-seq 211 Illumina HiSeq 2500 (Homo sapiens)
C
  GSE221688 		Chip-seq;scATAC-Seq;scRNA-Seq 12 Illumina NovaSeq 6000 (Homo sapiens)
C
  GSE100376 		ATAC-seq 24 Illumina NextSeq 500 (Homo sapiens)
C
  GSE165705 		Chip-seq 30 Illumina NovaSeq 6000 (Homo sapiens)
C
  GSE165703 		ATAC-seq 82 Illumina HiSeq 4000 (Homo sapiens)
C
  GSE144329 		ATAC-seq 96 NextSeq 550 (Homo sapiens)
GSE205204 RNA-seq 14 Illumina NovaSeq 6000 (Homo sapiens)
GSE246082 RNA-seq 6 Illumina HiSeq 4000 (Homo sapiens)
C
  GSE100266 		ATAC-seq;Chip-seq;RNA-seq 32 Illumina HiSeq 2500 (Homo sapiens)
GSE125686 RNA-seq 62 Illumina HiSeq 2000 (Homo sapiens);Illumina HiSeq 2500 (Homo sapiens);Illumina NextSeq 500 (Homo sapiens)
GSE164264 RNA-seq 6 BGISEQ-500 (Homo sapiens)


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE220859 - LOC105373133 peak across samples

Peak Plot

> Dataset: GSE211651 - LOC105373133 peak across samples

Peak Plot

> Dataset: GSE221688 - LOC105373133 peak across samples

Peak Plot

> Dataset: GSE100376 - LOC105373133 peak across samples

Peak Plot

> Dataset: GSE165705 - LOC105373133 peak across samples

Peak Plot

> Dataset: GSE165703 - LOC105373133 peak across samples

Peak Plot

> Dataset: GSE144329 - LOC105373133 peak across samples

Peak Plot

> Dataset: GSE100266 - LOC105373133 peak across samples

Peak Plot