HPV Target gene Detail Information

> MIR100HG Gene Search Result


Gene Information
Gene Name MIR100HG
Gene ID 399959
Gene Full Name mir-100-let-7a-2-mir-125b-1 cluster host gene
Gene Alias AGD1|linc-NeD125|lncRNA-N2
Transcripts ENSG00000255248
Virus HPV
Gene Type ncRNA
HGNC ID HGNC:39522
OMIM ID 615965
lncRNASNP2 ID MIR100HG
Summary This gene produces long non-coding RNAs that act as regulators of cell proliferation. Alternative promoter usage and splicing results in multiple transcript variants. Some transcript variants may promote growth, while others may act to negatively regulate cell division. [provided by RefSeq, May 2016]
Target gene [MIR100HG] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
5004864 chr11 11 0 0 11 View
5005525 chr11 17 19 66 102 View
5016645 chr11 6 2 60 68 View
5016646 chr11 16 2 1 19 View
5016647 chr11 52 12 8 72 View
5016648 chr11 43 1 0 44 View
5016649 chr11 4 7 0 11 View

Target gene [MIR100HG] related to Omics data
Data ID Experiment type Sample number Platform
C
  GSE183048 		Chip-seq 24 Illumina HiSeq 4000 (Homo sapiens)
GSE40774 Expression array 134 Agilent-026652 Whole Human Genome Microarray 4x44K v2 (Probe Name version)
GSE169622 Methylation profiling (Array) 9 Infinium MethylationEPIC
GSE65858 Expression array 270 Illumina HumanHT-12 V4.0 expression beadchip
GSE181805 Expression array 25 [HTA-2_0] Affymetrix Human Transcriptome Array 2.0 [transcript (gene) version]
GSE196215 RNA-seq 8 Illumina NovaSeq 6000 (Homo sapiens)
GSE140662 Expression array 8 [HTA-2_0] Affymetrix Human Transcriptome Array 2.0 [transcript (gene) version]
GSE55542 Expression array 36 Agilent-039494 SurePrint G3 Human GE v2 8x60K Microarray 039381 (Probe Name version)
C
  GSE143026 		ATAC-seq;Chip-seq;RNA-seq 30 Illumina HiSeq 2500 (Homo sapiens)
TCGA_CESC DNA methylation sequencing;RNA-seq 288 TCGA
GSE51993 Expression array 48 Illumina Human v2 MicroRNA expression beadchip;Illumina HumanHT-12 V4.0 expression beadchip
GSE55550 Expression array 155 Agilent-039494 SurePrint G3 Human GE v2 8x60K Microarray 039381 (Probe Name version)
GSE165883 RNA-seq 20 Illumina NextSeq 500 (Homo sapiens)


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE183048 - MIR100HG peak across samples

Peak Plot

> Dataset: GSE143026 - MIR100HG peak across samples

Peak Plot