HIV Target gene Detail Information

> MIR1268A Gene Search Result


Gene Information
Gene Name MIR1268A
Gene ID 100302233
Gene Full Name microRNA 1268a
Gene Alias MIR1268|MIRN1268|hsa-mir-1268|hsa-mir-1268a
Transcripts ENSG00000221641
Virus HIV
Gene Type ncRNA
HGNC ID HGNC:35336
miRBase ID MI0006405
miRBase Name hsa-mir-1268a
Summary microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]
Target gene [MIR1268A] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
4001693 chr19 134 6 0 140 View
4001966 chr9 105 9 6 120 View
4003439 chr19 44 17 0 61 View
4005839 chr9 29 0 0 29 View
4005993 chr9 26 2 0 28 View
4006055 chr9 27 0 0 27 View
4006403 chr9 22 3 0 25 View
4007287 chr9 13 6 1 20 View
4010778 chr9 2 6 0 8 View
4012543 chr9 4 1 0 5 View
4013059 chr9 3 1 0 4 View
4013951 chr9 2 1 0 3 View
4013952 chr9 2 1 0 3 View
4015644 chr19 1 0 0 1 View

Target gene [MIR1268A] related to Omics data
Data ID Experiment type Sample number Platform
GSE128121 RNA-seq 16 Illumina HiSeq 4000 (Homo sapiens)
GSE165708 RNA-seq 100 Illumina HiSeq 4000 (Homo sapiens)
GSE211651 Chip-seq;RNA-seq;PRO-seq 39 Illumina NextSeq 500 (Homo sapiens);Illumina NovaSeq 6000 (Homo sapiens)
GSE162914 RNA-seq 211 Illumina HiSeq 2500 (Homo sapiens)
GSE144332 RNA-seq 75 NextSeq 550 (Homo sapiens)
GSE279982 Methylation profiling (Array) 576 Infinium MethylationEPIC
GSE205204 RNA-seq 14 Illumina NovaSeq 6000 (Homo sapiens)
GSE246082 RNA-seq 6 Illumina HiSeq 4000 (Homo sapiens)
GSE100266 ATAC-seq;Chip-seq;RNA-seq 32 Illumina HiSeq 2500 (Homo sapiens)
GSE125686 RNA-seq 62 Illumina HiSeq 2000 (Homo sapiens);Illumina HiSeq 2500 (Homo sapiens);Illumina NextSeq 500 (Homo sapiens)
GSE164264 RNA-seq 6 BGISEQ-500 (Homo sapiens)