HPV Target gene Detail Information

> PDCD1LG2 Gene Search Result


Gene Information
Gene Name PDCD1LG2
Gene ID 80380
Gene Full Name programmed cell death 1 ligand 2
Gene Alias B7DC|Btdc|CD273|PD-L2|PDCD1L2|PDL2|bA574F11.2
Transcripts ENSG00000197646
Virus HPV
Gene Type protein-coding
HPA Location Info Cytosol;Secreted - unknown location;
Membrane Info Cancer-related genes, CD markers, Predicted membrane proteins, Predicted secreted proteins
Uniport_ID Q9BQ51
HGNC ID HGNC:18731
OMIM ID 605723
Summary Involved in negative regulation of activated T cell proliferation; negative regulation of interleukin-10 production; and negative regulation of type II interferon production. Predicted to be located in plasma membrane. Predicted to be active in external side of plasma membrane. Biomarker of pulmonary tuberculosis. [provided by Alliance of Genome Resources, Apr 2025]
Target gene [PDCD1LG2] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
5001607 chr9 24 1 0 25 View
5003584 chr9 2 1 0 3 View
5003585 chr9 2 1 0 3 View
5016429 chr9 19 6 2 27 View
5016855 chr9 4 1 0 5 View
5016856 chr9 1 2 0 3 View
5017846 chr9 1236 2672 1943 5851 View
5017847 chr9 1200 2581 1926 5707 View
5017848 chr9 2036 402 241 2679 View
5017849 chr9 19 0 0 19 View
5017851 chr9 156 57 77 290 View
5017857 chr9 3 33 3 39 View
5017858 chr9 123 12 44 179 View
5017859 chr9 5 0 1 6 View
5017860 chr9 36 1 0 37 View

Target gene [PDCD1LG2] related to Omics data
Data ID Experiment type Sample number Platform
C
  GSE183048
Chip-seq 24 Illumina HiSeq 4000 (Homo sapiens)
GSE226620 scRNA-seq 30 HiSeq X Ten (Homo sapiens)
GSE169622 Methylation profiling (Array) 9 Infinium MethylationEPIC
GSE55550 Expression array 155 Agilent-039494 SurePrint G3 Human GE v2 8x60K Microarray 039381 (Probe Name version)
GSE181805 Expression array 25 [HTA-2_0] Affymetrix Human Transcriptome Array 2.0 [transcript (gene) version]
GSE196215 RNA-seq 8 Illumina NovaSeq 6000 (Homo sapiens)
GSE140662 Expression array 8 [HTA-2_0] Affymetrix Human Transcriptome Array 2.0 [transcript (gene) version]
GSE55542 Expression array 36 Agilent-039494 SurePrint G3 Human GE v2 8x60K Microarray 039381 (Probe Name version)
C
  GSE143026
ATAC-seq;Chip-seq;RNA-seq 30 Illumina HiSeq 2500 (Homo sapiens)
M
  TCGA_CESC
DNA methylation sequencing;RNA-seq 288 TCGA
GSE51993 Expression array 48 Illumina Human v2 MicroRNA expression beadchip;Illumina HumanHT-12 V4.0 expression beadchip
GSE199029 Variation;RNA-seq 44 NanoString Human nCounter PanCancer IO360 Panel
GSE165883 RNA-seq 20 Illumina NextSeq 500 (Homo sapiens)


When the query gene is differentially changed in the dataset, a volcano/bar plot will be displayed.


> Dataset: GSE183048 - PDCD1LG2 peak across samples

Peak Plot


> Dataset: GSE143026 - PDCD1LG2 peak across samples

Peak Plot