HPV Target gene Detail Information

> RTN4RL1 Gene Search Result


Gene Information
Gene Name RTN4RL1
Gene ID 146760
Gene Full Name reticulon 4 receptor like 1
Gene Alias NGRH2|NgR3
Transcripts ENSG00000185924
Virus HPV
Gene Type protein-coding
HPA Location Info Actin filaments;Nucleoplasm, Plasma membrane, Midbody;Intracellular and membrane;
Membrane Info Predicted intracellular proteins
Uniport_ID Q86UN2
HGNC ID HGNC:21329
OMIM ID 610461
Summary Enables signaling receptor activity. Predicted to be involved in negative regulation of axon regeneration. Located in cell surface and plasma membrane. [provided by Alliance of Genome Resources, Apr 2025]
Target gene [RTN4RL1] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
5000249 chr17 97 245 96 438 View
5000320 chr17 75 120 113 308 View
5000542 chr17 125 8 8 141 View
5000570 chr17 118 8 6 132 View
5000575 chr17 117 8 4 129 View
5001264 chr17 11 30 0 41 View
5001530 chr17 27 2 0 29 View
5001561 chr17 26 2 0 28 View
5001708 chr17 11 13 0 24 View
5001952 chr17 11 7 0 18 View
5002068 chr17 9 7 0 16 View
5002169 chr17 7 7 0 14 View
5002316 chr17 8 1 3 12 View
5002612 chr17 7 1 1 9 View
5002699 chr17 6 1 1 8 View
5002811 chr17 7 0 0 7 View
5003409 chr17 2 1 0 3 View
5015142 chr17 7 0 0 7 View
5015143 chr17 149 22 23 194 View
5015144 chr17 22 31 0 53 View

Target gene [RTN4RL1] related to Omics data
Data ID Experiment type Sample number Platform
GSE40774 Expression array 134 Agilent-026652 Whole Human Genome Microarray 4x44K v2 (Probe Name version)
GSE169622 Methylation profiling (Array) 9 Infinium MethylationEPIC
GSE65858 Expression array 270 Illumina HumanHT-12 V4.0 expression beadchip
GSE181805 Expression array 25 [HTA-2_0] Affymetrix Human Transcriptome Array 2.0 [transcript (gene) version]
GSE196215 RNA-seq 8 Illumina NovaSeq 6000 (Homo sapiens)
GSE138080 Expression array 35 Agilent-014850 Whole Human Genome Microarray 4x44K G4112F (Feature Number version)
GSE140662 Expression array 8 [HTA-2_0] Affymetrix Human Transcriptome Array 2.0 [transcript (gene) version]
GSE55542 Expression array 36 Agilent-039494 SurePrint G3 Human GE v2 8x60K Microarray 039381 (Probe Name version)
C
  GSE143026 		ATAC-seq;Chip-seq;RNA-seq 30 Illumina HiSeq 2500 (Homo sapiens)
TCGA_CESC DNA methylation sequencing;RNA-seq 288 TCGA
GSE51993 Expression array 48 Illumina Human v2 MicroRNA expression beadchip;Illumina HumanHT-12 V4.0 expression beadchip
GSE55550 Expression array 155 Agilent-039494 SurePrint G3 Human GE v2 8x60K Microarray 039381 (Probe Name version)
GSE165883 RNA-seq 20 Illumina NextSeq 500 (Homo sapiens)


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE143026 - RTN4RL1 peak across samples

Peak Plot