HPV Target gene Detail Information

> STX17 Gene Search Result


Gene Information
Gene Name STX17
Gene ID 55014
Gene Full Name syntaxin 17
Gene Alias -
Transcripts ENSG00000136874
Virus HPV
Gene Type protein-coding
HPA Location Info Nucleoli, Cytosol;
Membrane Info Predicted intracellular proteins, Predicted membrane proteins, Transporters
Uniport_ID P56962
HGNC ID HGNC:11432
OMIM ID 604204
Summary Enables SNAP receptor activity; SNARE binding activity; and protein phosphatase binding activity. Involved in several processes, including autophagosome membrane docking; endoplasmic reticulum to Golgi vesicle-mediated transport; and endoplasmic reticulum-Golgi intermediate compartment organization. Acts upstream of or within protein localization to phagophore assembly site. Located in several cellular components, including autophagosome membrane; endoplasmic reticulum-Golgi intermediate compartment; and mitochondria-associated endoplasmic reticulum membrane contact site. Part of SNARE complex. [provided by Alliance of Genome Resources, Apr 2025]
Target gene [STX17] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
5000322 chr9 275 14 18 307 View
5000340 chr9 269 6 16 291 View
5000841 chr9 74 3 0 77 View
5002105 chr9 12 4 0 16 View
5003058 chr9 2 4 0 6 View
5003590 chr9 1 2 0 3 View
5004226 chr9 1 0 0 1 View
5009825 chr9 8 1 0 9 View
5009826 chr9 221 23 9 253 View
5016481 chr9 25 2 0 27 View
5016482 chr9 10 4 0 14 View
5017880 chr9 78 3 0 81 View
5017881 chr9 8 1 0 9 View

Target gene [STX17] related to Omics data
Data ID Experiment type Sample number Platform
C
  GSE183048
Chip-seq 24 Illumina HiSeq 4000 (Homo sapiens)
GSE40774 Expression array 134 Agilent-026652 Whole Human Genome Microarray 4x44K v2 (Probe Name version)
GSE169622 Methylation profiling (Array) 9 Infinium MethylationEPIC
GSE65858 Expression array 270 Illumina HumanHT-12 V4.0 expression beadchip
GSE181805 Expression array 25 [HTA-2_0] Affymetrix Human Transcriptome Array 2.0 [transcript (gene) version]
GSE196215 RNA-seq 8 Illumina NovaSeq 6000 (Homo sapiens)
GSE138080 Expression array 35 Agilent-014850 Whole Human Genome Microarray 4x44K G4112F (Feature Number version)
GSE140662 Expression array 8 [HTA-2_0] Affymetrix Human Transcriptome Array 2.0 [transcript (gene) version]
GSE55542 Expression array 36 Agilent-039494 SurePrint G3 Human GE v2 8x60K Microarray 039381 (Probe Name version)
C
  GSE143026
ATAC-seq;Chip-seq;RNA-seq 30 Illumina HiSeq 2500 (Homo sapiens)
TCGA_CESC DNA methylation sequencing;RNA-seq 288 TCGA
GSE51993 Expression array 48 Illumina Human v2 MicroRNA expression beadchip;Illumina HumanHT-12 V4.0 expression beadchip
GSE55550 Expression array 155 Agilent-039494 SurePrint G3 Human GE v2 8x60K Microarray 039381 (Probe Name version)
GSE165883 RNA-seq 20 Illumina NextSeq 500 (Homo sapiens)


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE183048 - STX17 peak across samples

Peak Plot


> Dataset: GSE143026 - STX17 peak across samples

Peak Plot