SARS-CoV-2 Target gene Detail Information

> GIGYF2 Gene Search Result


Gene Information
Gene Name GIGYF2
Gene ID 26058
Gene Full Name GRB10 interacting GYF protein 2
Gene Alias GYF2|PARK11|PERQ2|PERQ3|TNRC15
Transcripts ENSG00000204120
Virus SARS-CoV-2
Gene Type protein-coding
HPA Location Info Cytosol;
Membrane Info Disease related genes, Human disease related genes, Predicted intracellular proteins
Uniport_ID Q6Y7W6
HGNC ID HGNC:11960
OMIM ID 612003
Summary This gene contains CAG trinucleotide repeats and encodes a protein containing several stretches of polyglutamine residues. The encoded protein may be involved in the regulation of tyrosine kinase receptor signaling. This gene is located in a chromosomal region that was genetically linked to Parkinson disease type 11, and mutations in this gene were thought to be causative for this disease. However, more recent studies in different populations have been unable to replicate this association. Alternative splicing results in multiple transcript variants. [provided by RefSeq, May 2013]
Target gene [GIGYF2] related to virus gene/protein/region

Mutation Table: if previous studies reported that target gene was related to virus gene/region/protein, the information in this literature was listed in this section


ID PMID Mutation Gene/Protein/Region Encoding Gene/Protein Disease Description Detail
1 38365933 A929G
ORF1ab
ORF1ab
COVID-19
Cell line
G
R
T
View
2 38365933 I222V
ORF1ab
ORF1ab
COVID-19
Cell line
G
R
T
View

Target gene [GIGYF2] related to Omics data
Data ID Experiment type Sample number Platform
GSE167075 MeRIP-seq;RNA-seq 16 Illumina NovaSeq 6000 (Homo sapiens; Severe acute respiratory syndrome coronavirus 2);Illumina NovaSeq 6000 (Chlorocebus aethiops; Severe acute respiratory syndrome coronavirus 2)
GSE164485 scRNA-seq 36 Illumina HiSeq 2500 (Homo sapiens)
GSE190680 RNA-seq 100 Illumina NovaSeq 6000 (Homo sapiens)
GSE207923 RNA-seq 27 Illumina NovaSeq 6000 (Homo sapiens)
GSE152641 RNA-seq 86 Illumina NovaSeq 6000 (Homo sapiens)
GSE283771 RNA-seq 6 Illumina HiSeq 2000 (Homo sapiens)
GSE211934 RNA-seq 8 Illumina NovaSeq 6000 (Homo sapiens)
GSE163959 RNA-seq 48 Illumina NextSeq 500 (Homo sapiens)
C
  GSE163623
Chip-seq 5 Illumina NovaSeq 6000 (Homo sapiens)
GSE166253 RNA-seq 26 HiSeq X Ten (Homo sapiens)
GSE153218 RNA-seq 16 Illumina NextSeq 500 (Homo sapiens)
GSE162323 RNA-seq 42 Illumina NovaSeq 6000 (Homo sapiens);Illumina NovaSeq 6000 (Homo sapiens; Severe acute respiratory syndrome coronavirus 2)
GSE199816 RNA-seq 27 DNBSEQ-G400 (Homo sapiens)
E
  GSE215262
RNA-seq 25 Illumina NovaSeq 6000 (Homo sapiens)


When the query gene is differentially changed in the dataset, a volcano/bar plot will be displayed.


> Dataset: GSE215262 - GIGYF2 expression across samples

Volcano Plot


Bar Plot