SARS-CoV-2 Target gene Detail Information

> IFNB1 Gene Search Result


Gene Information
Gene Name IFNB1
Gene ID 3456
Gene Full Name interferon beta 1
Gene Alias IFB|IFF|IFN-beta|IFNB
Transcripts ENSG00000171855
Virus SARS-CoV-2
Gene Type protein-coding
HPA Location Info Secreted to blood;
Membrane Info Cancer-related genes, Predicted secreted proteins
Uniport_ID P01574
HGNC ID HGNC:5434
OMIM ID 147640
Summary This gene encodes a cytokine that belongs to the interferon family of signaling proteins, which are released as part of the innate immune response to pathogens. The protein encoded by this gene belongs to the type I class of interferons, which are important for defense against viral infections. In addition, type I interferons are involved in cell differentiation and anti-tumor defenses. Following secretion in response to a pathogen, type I interferons bind a homologous receptor complex and induce transcription of genes such as those encoding inflammatory cytokines and chemokines. Overactivation of type I interferon secretion is linked to autoimmune diseases. Mice deficient for this gene display several phenotypes including defects in B cell maturation and increased susceptibility to viral infection. [provided by RefSeq, Sep 2015]
Target gene [IFNB1] related to virus gene/protein/region

Mutation Table: if previous studies reported that target gene was related to virus gene/region/protein, the information in this literature was listed in this section


ID PMID Mutation Gene/Protein/Region Encoding Gene/Protein Disease Description Detail
1 38397027 H47Y
ORF7a
ORF7a

G
R
S
T
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Target gene [IFNB1] related to Omics data
Data ID Experiment type Sample number Platform
GSE167075 MeRIP-seq;RNA-seq 16 Illumina NovaSeq 6000 (Homo sapiens; Severe acute respiratory syndrome coronavirus 2);Illumina NovaSeq 6000 (Chlorocebus aethiops; Severe acute respiratory syndrome coronavirus 2)
GSE190680 RNA-seq 100 Illumina NovaSeq 6000 (Homo sapiens)
GSE207923 RNA-seq 27 Illumina NovaSeq 6000 (Homo sapiens)
GSE152641 RNA-seq 86 Illumina NovaSeq 6000 (Homo sapiens)
GSE283771 RNA-seq 6 Illumina HiSeq 2000 (Homo sapiens)
GSE211934 RNA-seq 8 Illumina NovaSeq 6000 (Homo sapiens)
GSE163959 RNA-seq 48 Illumina NextSeq 500 (Homo sapiens)
C
  GSE163623
Chip-seq 5 Illumina NovaSeq 6000 (Homo sapiens)
GSE166253 RNA-seq 26 HiSeq X Ten (Homo sapiens)
GSE153218 RNA-seq 16 Illumina NextSeq 500 (Homo sapiens)
E
  GSE162323
RNA-seq 42 Illumina NovaSeq 6000 (Homo sapiens);Illumina NovaSeq 6000 (Homo sapiens; Severe acute respiratory syndrome coronavirus 2)
GSE199816 RNA-seq 27 DNBSEQ-G400 (Homo sapiens)
GSE215262 RNA-seq 25 Illumina NovaSeq 6000 (Homo sapiens)


When the query gene is differentially changed in the dataset, a volcano/bar plot will be displayed.


> Dataset: GSE162323 - IFNB1 expression across samples

Volcano Plot


Bar Plot