EBV Target gene Detail Information

> LINC00469 Gene Search Result


Gene Information
Gene Name LINC00469
Gene ID 283982
Gene Full Name long intergenic non-protein coding RNA 469
Gene Alias C17orf54
Transcripts ENSG00000177338
Virus EBV
Gene Type ncRNA
HGNC ID HGNC:26863
lncRNASNP2 ID LINC00469
Target gene [LINC00469] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
3000090 chr17 189 5 8 202 View

Target gene [LINC00469] related to Omics data
Data ID Experiment type Sample number Platform
C
  GSE246060
Chip-seq 26 Illumina NovaSeq 6000 (Homo sapiens)
GSE45919 Expression array 24 Illumina HumanHT-12 V4.0 expression beadchip
C
  GSE198334
Chip-seq 4 Illumina NextSeq 500 (Homo sapiens)
GSE223328 Expression array 16 Agilent-072363 SurePrint G3 Human GE v3 8x60K Microarray 039494 [Probe Name Version]
GSE208281 RNA-seq 50 Illumina NextSeq 500 (Homo sapiens)
GSE165194 RNA-seq 3 Illumina NextSeq 500 (Homo sapiens)
C
  GSE246059
ATAC-seq 8 Illumina NextSeq 500 (Homo sapiens);Illumina NovaSeq 6000 (Homo sapiens)
GSE177046 RNA-seq 6 Illumina HiSeq 2000 (Homo sapiens)
C
  GSE225248
Chip-seq 12 Illumina NextSeq 500 (Homo sapiens)
GSE102203 Expression array 10 [HuGene-2_0-st] Affymetrix Human Gene 2.0 ST Array [probe set (exon) version]
GSE85599 Expression array 17 [HTA-2_0] Affymetrix Human Transcriptome Array 2.0 [transcript (gene) version]
GSE58240 Expression array 32 Illumina HumanHT-12 V4.0 expression beadchip
GSE181906 RNA-seq 24 Illumina NovaSeq 6000 (Homo sapiens)


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE246060 - LINC00469 peak across samples

Peak Plot


> Dataset: GSE198334 - LINC00469 peak across samples

Peak Plot


> Dataset: GSE246059 - LINC00469 peak across samples

Peak Plot


> Dataset: GSE225248 - LINC00469 peak across samples

Peak Plot