HIV Target gene Detail Information

> LINC02391 Gene Search Result


Gene Information
Gene Name LINC02391
Gene ID 101930023
Gene Full Name long intergenic non-protein coding RNA 2391
Gene Alias -
Transcripts ENSG00000277851
Virus HIV
Gene Type ncRNA
HGNC ID HGNC:53318
lncRNASNP2 ID LINC02391
Target gene [LINC02391] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
4001134 chr12 10 122 75 207 View
4012054 chr12 0 2 3 5 View

Target gene [LINC02391] related to Omics data
Data ID Experiment type Sample number Platform
C
  GSE30738 		Chip-seq 2 Illumina Genome Analyzer II (Homo sapiens)
GSE165708 RNA-seq 100 Illumina HiSeq 4000 (Homo sapiens)
C
  GSE211651 		Chip-seq;RNA-seq;PRO-seq 39 Illumina NextSeq 500 (Homo sapiens);Illumina NovaSeq 6000 (Homo sapiens)
GSE162914 RNA-seq 211 Illumina HiSeq 2500 (Homo sapiens)
C
  GSE221688 		Chip-seq;scATAC-Seq;scRNA-Seq 12 Illumina NovaSeq 6000 (Homo sapiens)
GSE144332 RNA-seq 75 NextSeq 550 (Homo sapiens)
C
  GSE100376 		ATAC-seq 24 Illumina NextSeq 500 (Homo sapiens)
C
  GSE165705 		Chip-seq 30 Illumina NovaSeq 6000 (Homo sapiens)
C
  GSE165703 		ATAC-seq 82 Illumina HiSeq 4000 (Homo sapiens)
C
  GSE144329 		ATAC-seq 96 NextSeq 550 (Homo sapiens)
GSE205204 RNA-seq 14 Illumina NovaSeq 6000 (Homo sapiens)
GSE246082 RNA-seq 6 Illumina HiSeq 4000 (Homo sapiens)
C
  GSE100266 		ATAC-seq;Chip-seq;RNA-seq 32 Illumina HiSeq 2500 (Homo sapiens)
GSE125686 RNA-seq 62 Illumina HiSeq 2000 (Homo sapiens);Illumina HiSeq 2500 (Homo sapiens);Illumina NextSeq 500 (Homo sapiens)
GSE164264 RNA-seq 6 BGISEQ-500 (Homo sapiens)


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE30738 - LINC02391 peak across samples

Peak Plot

> Dataset: GSE211651 - LINC02391 peak across samples

Peak Plot

> Dataset: GSE221688 - LINC02391 peak across samples

Peak Plot

> Dataset: GSE100376 - LINC02391 peak across samples

Peak Plot

> Dataset: GSE165705 - LINC02391 peak across samples

Peak Plot

> Dataset: GSE165703 - LINC02391 peak across samples

Peak Plot

> Dataset: GSE144329 - LINC02391 peak across samples

Peak Plot

> Dataset: GSE100266 - LINC02391 peak across samples

Peak Plot