HPV Target gene Detail Information

> MAPK10 Gene Search Result


Gene Information
Gene Name MAPK10
Gene ID 5602
Gene Full Name mitogen-activated protein kinase 10
Gene Alias JNK3|JNK3A|PRKM10|SAPK1b|p493F12|p54bSAPK
Transcripts ENSG00000109339
Virus HPV
Gene Type protein-coding
HPA Location Info Nucleoplasm;
Membrane Info Disease related genes, Enzymes, Human disease related genes, Potential drug targets, Predicted intracellular proteins, RAS pathway related proteins
Uniport_ID P53779
HGNC ID HGNC:6872
OMIM ID 602897
Summary The protein encoded by this gene is a member of the MAP kinase family. MAP kinases act as integration points for multiple biochemical signals, and thus are involved in a wide variety of cellular processes, such as proliferation, differentiation, transcription regulation and development. This kinase is specifically expressed in a subset of neurons in the nervous system, and is activated by threonine and tyrosine phosphorylation. Targeted deletion of this gene in mice suggests that it may have a role in stress-induced neuronal apoptosis. Alternatively spliced transcript variants encoding different isoforms have been described for this gene. A recent study provided evidence for translational readthrough in this gene, and expression of an additional C-terminally extended isoform via the use of an alternative in-frame translation termination codon. [provided by RefSeq, Dec 2017]
Target gene [MAPK10] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
5001142 chr4 15 20 13 48 View
5002303 chr4 11 1 0 12 View
5003577 chr4 3 0 0 3 View
5003848 chr4 2 0 0 2 View
5004043 chr4 1 0 0 1 View
5008612 chr4 7 3 0 10 View
5008678 chr4 0 4 0 4 View
5013534 chr4 0 0 0 0 View
5015937 chr4 1 4 0 5 View
5015938 chr4 11 8 0 19 View
5015939 chr4 2 0 0 2 View
5015940 chr4 4 0 0 4 View
5015941 chr4 3 0 0 3 View
5015942 chr4 13 14 2 29 View
5015943 chr4 1 15 0 16 View

Target gene [MAPK10] related to Omics data
Data ID Experiment type Sample number Platform
C
  GSE183048
Chip-seq 24 Illumina HiSeq 4000 (Homo sapiens)
GSE169622 Methylation profiling (Array) 9 Infinium MethylationEPIC
GSE65858 Expression array 270 Illumina HumanHT-12 V4.0 expression beadchip
GSE55550 Expression array 155 Agilent-039494 SurePrint G3 Human GE v2 8x60K Microarray 039381 (Probe Name version)
GSE181805 Expression array 25 [HTA-2_0] Affymetrix Human Transcriptome Array 2.0 [transcript (gene) version]
GSE196215 RNA-seq 8 Illumina NovaSeq 6000 (Homo sapiens)
GSE138080 Expression array 35 Agilent-014850 Whole Human Genome Microarray 4x44K G4112F (Feature Number version)
GSE140662 Expression array 8 [HTA-2_0] Affymetrix Human Transcriptome Array 2.0 [transcript (gene) version]
GSE55542 Expression array 36 Agilent-039494 SurePrint G3 Human GE v2 8x60K Microarray 039381 (Probe Name version)
C
  GSE143026
ATAC-seq;Chip-seq;RNA-seq 30 Illumina HiSeq 2500 (Homo sapiens)
M
  TCGA_CESC
DNA methylation sequencing;RNA-seq 288 TCGA
GSE51993 Expression array 48 Illumina Human v2 MicroRNA expression beadchip;Illumina HumanHT-12 V4.0 expression beadchip
GSE197461 scRNA-seq 16 Illumina NovaSeq 6000 (Homo sapiens)
GSE199029 Variation;RNA-seq 44 NanoString Human nCounter PanCancer IO360 Panel
GSE165883 RNA-seq 20 Illumina NextSeq 500 (Homo sapiens)


When the query gene is differentially changed in the dataset, a volcano/bar plot will be displayed.


> Dataset: GSE183048 - MAPK10 peak across samples

Peak Plot


> Dataset: GSE143026 - MAPK10 peak across samples

Peak Plot