HPV Target gene Detail Information

> NFE2L2 Gene Search Result


Gene Information
Gene Name NFE2L2
Gene ID 4780
Gene Full Name NFE2 like bZIP transcription factor 2
Gene Alias HEBP1|IMDDHH|NRF2|Nrf-2
Transcripts ENSG00000116044
Virus HPV
Gene Type protein-coding
HPA Location Info Nucleoplasm, Plasma membrane;Golgi apparatus, Centrosome, Basal body, Cytosol;
Membrane Info Cancer-related genes, Disease related genes, Human disease related genes, Predicted intracellular proteins, Transcription factors
Uniport_ID Q16236
HGNC ID HGNC:7782
OMIM ID 600492
Summary This gene encodes a transcription factor which is a member of a small family of basic leucine zipper (bZIP) proteins. The encoded transcription factor regulates genes which contain antioxidant response elements (ARE) in their promoters; many of these genes encode proteins involved in response to injury and inflammation which includes the production of free radicals. Multiple transcript variants encoding different isoforms have been characterized for this gene. [provided by RefSeq, Sep 2015]
Target gene [NFE2L2] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
5007130 chr2 21 7 3 31 View
5007131 chr2 0 0 0 0 View
5013259 chr2 34 17 0 51 View
5013260 chr2 478 174 47 699 View
5013261 chr2 473 172 47 692 View
5015586 chr2 7 17 2 26 View
5015587 chr2 60 9 4 73 View
5015588 chr2 14 4 3 21 View
5015589 chr2 13 1 0 14 View
5015590 chr2 5 0 0 5 View
5016722 chr2 321 30 0 351 View

Target gene [NFE2L2] related to Omics data
Data ID Experiment type Sample number Platform
C
  GSE183048
Chip-seq 24 Illumina HiSeq 4000 (Homo sapiens)
S
  GSE226620
scRNA-seq 30 HiSeq X Ten (Homo sapiens)
GSE139324 scRNA-seq 63 Illumina NextSeq 500 (Homo sapiens)
GSE169622 Methylation profiling (Array) 9 Infinium MethylationEPIC
GSE65858 Expression array 270 Illumina HumanHT-12 V4.0 expression beadchip
GSE55550 Expression array 155 Agilent-039494 SurePrint G3 Human GE v2 8x60K Microarray 039381 (Probe Name version)
GSE181805 Expression array 25 [HTA-2_0] Affymetrix Human Transcriptome Array 2.0 [transcript (gene) version]
GSE196215 RNA-seq 8 Illumina NovaSeq 6000 (Homo sapiens)
GSE164690 scRNA-seq 51 Illumina NextSeq 500 (Homo sapiens)
GSE138080 Expression array 35 Agilent-014850 Whole Human Genome Microarray 4x44K G4112F (Feature Number version)
GSE140662 Expression array 8 [HTA-2_0] Affymetrix Human Transcriptome Array 2.0 [transcript (gene) version]
GSE55542 Expression array 36 Agilent-039494 SurePrint G3 Human GE v2 8x60K Microarray 039381 (Probe Name version)
C
  GSE143026
ATAC-seq;Chip-seq;RNA-seq 30 Illumina HiSeq 2500 (Homo sapiens)
TCGA_CESC DNA methylation sequencing;RNA-seq 288 TCGA
GSE51993 Expression array 48 Illumina Human v2 MicroRNA expression beadchip;Illumina HumanHT-12 V4.0 expression beadchip
S
  GSE197461
scRNA-seq 16 Illumina NovaSeq 6000 (Homo sapiens)
GSE199029 Variation;RNA-seq 44 NanoString Human nCounter PanCancer IO360 Panel
GSE165883 RNA-seq 20 Illumina NextSeq 500 (Homo sapiens)


When the query gene is differentially changed in the dataset, a feature/violin plot will be displayed.


> Dataset: GSE226620 - Gene expression in cell subsets

> Dataset: GSE197461 - Gene expression in cell subsets