HPV Target gene Detail Information

> NFIB Gene Search Result


Gene Information
Gene Name NFIB
Gene ID 4781
Gene Full Name nuclear factor I B
Gene Alias CTF|HMGIC/NFIB|MACID|NF-I/B|NF1-B|NFI-B|NFI-RED|NFIB2|NFIB3
Transcripts ENSG00000147862
Virus HPV
Gene Type protein-coding
HPA Location Info Nucleoplasm, Nucleoli fibrillar center;
Membrane Info Cancer-related genes, Disease related genes, Predicted intracellular proteins, Transcription factors
Uniport_ID O00712
HGNC ID HGNC:7785
OMIM ID 600728
Summary Enables DNA-binding transcription activator activity, RNA polymerase II-specific; RNA polymerase II cis-regulatory region sequence-specific DNA binding activity; and transcription regulator inhibitor activity. Involved in brain development and regulation of DNA-templated transcription. Located in fibrillar center and nucleoplasm. [provided by Alliance of Genome Resources, Apr 2025]
Target gene [NFIB] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
5000950 chr9 54 3 7 64 View
5001105 chr9 32 6 13 51 View
5002603 chr9 6 2 1 9 View
5003392 chr9 2 0 1 3 View
5003393 chr9 2 1 0 3 View
5004265 chr9 0 0 0 0 View
5006503 chr9 28 0 0 28 View
5008819 chr9 21 8 0 29 View
5016430 chr9 23 33 21 77 View
5016431 chr9 61 30 2 93 View
5016432 chr9 4 2 2 8 View
5016433 chr9 4 2 2 8 View
5016434 chr9 7 0 0 7 View
5016435 chr9 4 4 3 11 View
5016436 chr9 7 2 12 21 View
5016437 chr9 5 2 10 17 View
5016438 chr9 5 2 10 17 View
5016439 chr9 4 1 1 6 View
5016440 chr9 10 1 9 20 View
5016441 chr9 6 0 1 7 View
5016442 chr9 413 31 0 444 View
5016443 chr9 382 5 1 388 View
5016444 chr9 115 2 0 117 View
5016445 chr9 28 4 2 34 View

Target gene [NFIB] related to Omics data
Data ID Experiment type Sample number Platform
C
  GSE183048 		Chip-seq 24 Illumina HiSeq 4000 (Homo sapiens)
S
  GSE226620 		scRNA-seq 30 HiSeq X Ten (Homo sapiens)
GSE40774 Expression array 134 Agilent-026652 Whole Human Genome Microarray 4x44K v2 (Probe Name version)
GSE169622 Methylation profiling (Array) 9 Infinium MethylationEPIC
GSE65858 Expression array 270 Illumina HumanHT-12 V4.0 expression beadchip
GSE181805 Expression array 25 [HTA-2_0] Affymetrix Human Transcriptome Array 2.0 [transcript (gene) version]
GSE196215 RNA-seq 8 Illumina NovaSeq 6000 (Homo sapiens)
S
  GSE164690 		scRNA-seq 51 Illumina NextSeq 500 (Homo sapiens)
GSE138080 Expression array 35 Agilent-014850 Whole Human Genome Microarray 4x44K G4112F (Feature Number version)
GSE140662 Expression array 8 [HTA-2_0] Affymetrix Human Transcriptome Array 2.0 [transcript (gene) version]
E
  GSE55542 		Expression array 36 Agilent-039494 SurePrint G3 Human GE v2 8x60K Microarray 039381 (Probe Name version)
C
  GSE143026 		ATAC-seq;Chip-seq;RNA-seq 30 Illumina HiSeq 2500 (Homo sapiens)
TCGA_CESC DNA methylation sequencing;RNA-seq 288 TCGA
GSE51993 Expression array 48 Illumina Human v2 MicroRNA expression beadchip;Illumina HumanHT-12 V4.0 expression beadchip
S
  GSE197461 		scRNA-seq 16 Illumina NovaSeq 6000 (Homo sapiens)
GSE55550 Expression array 155 Agilent-039494 SurePrint G3 Human GE v2 8x60K Microarray 039381 (Probe Name version)
GSE165883 RNA-seq 20 Illumina NextSeq 500 (Homo sapiens)


When the query gene is differentially changed in the dataset, a volcano/bar plot will be displayed.


> Dataset: GSE55542 - NFIB expression across samples

Volcano Plot

Bar Plot