HPV Target gene Detail Information

> NR4A2 Gene Search Result


Gene Information
Gene Name NR4A2
Gene ID 4929
Gene Full Name nuclear receptor subfamily 4 group A member 2
Gene Alias HZF-3|IDLDP|NOT|NURR1|RNR1|TINUR
Transcripts ENSG00000153234
Virus HPV
Gene Type protein-coding
HPA Location Info Nuclear speckles;
Membrane Info Cancer-related genes, Disease related genes, Human disease related genes, Nuclear receptors, Predicted intracellular proteins, Transcription factors
Uniport_ID P43354
HGNC ID HGNC:7981
OMIM ID 601828
Summary This gene encodes a member of the steroid-thyroid hormone-retinoid receptor superfamily. The encoded protein may act as a transcription factor. Mutations in this gene have been associated with disorders related to dopaminergic dysfunction, including Parkinson disease, schizophernia, and manic depression. Misregulation of this gene may be associated with rheumatoid arthritis. Alternatively spliced transcript variants have been described, but their biological validity has not been determined. [provided by RefSeq, Jul 2008]
Target gene [NR4A2] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
5000055 chr2 5726 4311 1949 11986 View
5000342 chr2 274 16 0 290 View
5000377 chr2 230 22 0 252 View
5000386 chr2 221 24 0 245 View
5000785 chr2 85 0 0 85 View
5001445 chr2 27 7 0 34 View
5003593 chr2 2 1 0 3 View
5008374 chr2 845 423 529 1797 View
5008382 chr2 151 2 0 153 View
5008383 chr2 132 1 0 133 View
5009864 chr2 21 7 2 30 View
5009865 chr2 1 5 0 6 View
5009893 chr2 2 1 0 3 View
5011468 chr2 873 536 179 1588 View
5015567 chr2 105 3 7 115 View
5015568 chr2 126 7 13 146 View
5015569 chr2 283 2 0 285 View
5017406 chr2 462 14 7 483 View
5017407 chr2 5 3 0 8 View
5017408 chr2 5 2 0 7 View
5017409 chr2 267 14 0 281 View

Target gene [NR4A2] related to Omics data
Data ID Experiment type Sample number Platform
C
  GSE183048 		Chip-seq 24 Illumina HiSeq 4000 (Homo sapiens)
S
  GSE226620 		scRNA-seq 30 HiSeq X Ten (Homo sapiens)
GSE40774 Expression array 134 Agilent-026652 Whole Human Genome Microarray 4x44K v2 (Probe Name version)
GSE139324 scRNA-seq 63 Illumina NextSeq 500 (Homo sapiens)
GSE169622 Methylation profiling (Array) 9 Infinium MethylationEPIC
GSE65858 Expression array 270 Illumina HumanHT-12 V4.0 expression beadchip
GSE181805 Expression array 25 [HTA-2_0] Affymetrix Human Transcriptome Array 2.0 [transcript (gene) version]
GSE196215 RNA-seq 8 Illumina NovaSeq 6000 (Homo sapiens)
GSE164690 scRNA-seq 51 Illumina NextSeq 500 (Homo sapiens)
GSE138080 Expression array 35 Agilent-014850 Whole Human Genome Microarray 4x44K G4112F (Feature Number version)
GSE140662 Expression array 8 [HTA-2_0] Affymetrix Human Transcriptome Array 2.0 [transcript (gene) version]
GSE55542 Expression array 36 Agilent-039494 SurePrint G3 Human GE v2 8x60K Microarray 039381 (Probe Name version)
C
  GSE143026 		ATAC-seq;Chip-seq;RNA-seq 30 Illumina HiSeq 2500 (Homo sapiens)
TCGA_CESC DNA methylation sequencing;RNA-seq 288 TCGA
GSE51993 Expression array 48 Illumina Human v2 MicroRNA expression beadchip;Illumina HumanHT-12 V4.0 expression beadchip
S
  GSE197461 		scRNA-seq 16 Illumina NovaSeq 6000 (Homo sapiens)
GSE55550 Expression array 155 Agilent-039494 SurePrint G3 Human GE v2 8x60K Microarray 039381 (Probe Name version)
GSE165883 RNA-seq 20 Illumina NextSeq 500 (Homo sapiens)


When the query gene is differentially changed in the dataset, a feature/violin plot will be displayed.


> Dataset: GSE226620 - Gene expression in cell subsets

> Dataset: GSE197461 - Gene expression in cell subsets