KSHV Target gene Detail Information

> SUMO1 Gene Search Result


Gene Information
Gene Name SUMO1
Gene ID 7341
Gene Full Name small ubiquitin like modifier 1
Gene Alias DAP1|GMP1|OFC10|PIC1|SENP2|SMT3|SMT3C|SMT3H3|UBL1
Transcripts ENSG00000116030
Virus KSHV
Gene Type protein-coding
HPA Location Info Nuclear membrane, Nuclear bodies;Nucleoplasm, Nucleoli;
Membrane Info Disease related genes, Human disease related genes, Predicted intracellular proteins
Uniport_ID P63165
HGNC ID HGNC:12502
OMIM ID 601912
Summary This gene encodes a protein that is a member of the SUMO (small ubiquitin-like modifier) protein family. It functions in a manner similar to ubiquitin in that it is bound to target proteins as part of a post-translational modification system. However, unlike ubiquitin which targets proteins for degradation, this protein is involved in a variety of cellular processes, such as nuclear transport, transcriptional regulation, apoptosis, and protein stability. It is not active until the last four amino acids of the carboxy-terminus have been cleaved off. Several pseudogenes have been reported for this gene. Alternate transcriptional splice variants encoding different isoforms have been characterized. [provided by RefSeq, Jul 2008]
Target gene [SUMO1] related to virus gene/protein/region

Mutation Table: if previous studies reported that target gene was related to virus gene/region/protein, the information in this literature was listed in this section


ID PMID Mutation Gene/Protein/Region Encoding Gene/Protein Disease Description Detail
1 23990779 H145L
RTA
ORF50
Cell line
R
T
View

Target gene [SUMO1] related to Omics data
Data ID Experiment type Sample number Platform
GSE232843 RNA-seq 12 Illumina NovaSeq 6000 (Homo sapiens)
GSE79029 RNA-seq 6 Illumina HiSeq 2000 (Homo sapiens)
C
  GSE202670
Chip-seq 14 Illumina Genome Analyzer (Homo sapiens)
GSE280380 RNA-seq 54 Illumina NovaSeq 6000 (Homo sapiens)
GSE158935 RNA-seq 6 Illumina HiSeq 2500 (Homo sapiens);Illumina NovaSeq 6000 (Homo sapiens)
C
  GSE132777
Chip-seq 10 Illumina HiSeq 2000 (Homo sapiens);Illumina NextSeq 500 (Homo sapiens)
GSE147063 Chip-seq;GRO-seq;4C-seq 10 Illumina NextSeq 500 (Homo sapiens);Illumina Hiseq 2500 (Homo sapiens)
GSE207589 RNA-seq 12 Illumina HiSeq 2000 (Homo sapiens)
GSE241095 RNA-seq 44 Illumina HiSeq 4000 (Homo sapiens);Illumina NovaSeq 6000 (Homo sapiens)
C
  GSE135740
Chip-seq 10 Illumina HiSeq 2000 (Homo sapiens);Illumina NextSeq 500 (Homo sapiens)
C
  GSE52421
Chip-seq 18 Illumina Genome Analyzer IIx (Homo sapiens)
GSE280006 RNA-seq 14 NextSeq 550 (Homo sapiens)
C
  GSE38411
Chip-seq 5 Illumina Genome Analyzer II (Homo sapiens);Illumina Genome Analyzer II (Human herpesvirus 8)
GSE260925 RNA-seq 24 Illumina NovaSeq 6000 (Homo sapiens)
C
  GSE56144
Chip-seq;RNA-seq 33 Illumina Genome Analyzer II (Homo sapiens);Illumina HiSeq 2500 (Homo sapiens)


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE202670 - SUMO1 peak across samples

Peak Plot


> Dataset: GSE132777 - SUMO1 peak across samples

Peak Plot


> Dataset: GSE135740 - SUMO1 peak across samples

Peak Plot


> Dataset: GSE52421 - SUMO1 peak across samples

Peak Plot


> Dataset: GSE38411 - SUMO1 peak across samples

Peak Plot


> Dataset: GSE56144 - SUMO1 peak across samples

Peak Plot