Accession	GSE202670
Status	2022/8/15
Title	Epigenetic reprogramming of Kaposi’s sarcoma-associated herpesvirus during hypoxic reactivation
Organism	Homo sapiens
Experiment type	Genome binding/occupancy profiling by high throughput sequencing
Summary	Chromatin Immuno-precipitaion sequencing was performed using H3-Ac, H3K4Me3, H3K9Me3, H3K27Me3, LANA, RTA and DNA Polymerase 1 alpha antibodies to investigate its enrichment on Kaposi's sarcoma associated herpesvirus (KSHV) genome in BC3 cells under normoxic or hypoxic conditions
Samples	GSM ID Sample info Characteristics Description GSM6128177 H3-Ac_BC3_Normoxia tissue:cell line; cell line:BC3; cell type:Human Blood B-Cells; chip antibody:H3-Ac; treatment:None - GSM6128178 H3-Ac_BC3_Hypoxia tissue:cell line; cell line:BC3; cell type:Human Blood B-Cells; chip antibody:H3-Ac; treatment:Hypoxia - GSM6128179 H3K4Me3_BC3_Normoxia tissue:cell line; cell line:BC3; cell type:Human Blood B-Cells; chip antibody:H3K4Me3; treatment:None - GSM6128180 H3K4Me3_BC3_Hypoxia tissue:cell line; cell line:BC3; cell type:Human Blood B-Cells; chip antibody:H3K4Me3; treatment:Hypoxia - GSM6128181 H3K9Me3_BC3_Normoxia tissue:cell line; cell line:BC3; cell type:Human Blood B-Cells; chip antibody:H3K9Me3; treatment:None - GSM6128182 H3K9Me3_BC3_Hypoxia tissue:cell line; cell line:BC3; cell type:Human Blood B-Cells; chip antibody:H3K9Me3; treatment:Hypoxia - GSM6128183 H3K27Me3_BC3_Normoxia tissue:cell line; cell line:BC3; cell type:Human Blood B-Cells; chip antibody:H3K27Me3; treatment:None - GSM6128184 H3K27Me3_BC3_Hypoxia tissue:cell line; cell line:BC3; cell type:Human Blood B-Cells; chip antibody:H3K27Me3; treatment:Hypoxia - GSM6128185 RTA_BC3_Normoxia tissue:cell line; cell line:BC3; cell type:Human Blood B-Cells; chip antibody:RTA; treatment:None - GSM6128186 RTA_BC3_Hypoxia tissue:cell line; cell line:BC3; cell type:Human Blood B-Cells; chip antibody:RTA; treatment:Hypoxia - GSM6128187 LANA_BC3_Normoxia tissue:cell line; cell line:BC3; cell type:Human Blood B-Cells; chip antibody:LANA; treatment:None - GSM6128188 LANA_BC3_Hypoxia tissue:cell line; cell line:BC3; cell type:Human Blood B-Cells; chip antibody:LANA; treatment:Hypoxia - GSM6128189 DNA Polymerase 1 alpha_BC3_Normoxia tissue:cell line; cell line:BC3; cell type:Human Blood B-Cells; chip antibody:DNA Polymerase 1 alpha; treatment:None - GSM6128190 DNA Polymerase 1 alpha_BC3_Hypoxia tissue:cell line; cell line:BC3; cell type:Human Blood B-Cells; chip antibody:DNA Polymerase 1 alpha; treatment:Hypoxia -
Platform	GPL9052  : Illumina Genome Analyzer (Homo sapiens)
Literature	36358814
Download	Download Genome Binding/Occupancy Profiling Analysis Data