KSHV Target gene Detail Information

> SUMO3 Gene Search Result


Gene Information
Gene Name SUMO3
Gene ID 6612
Gene Full Name small ubiquitin like modifier 3
Gene Alias SMT3A|SMT3H1|SUMO-3|Smt3B
Transcripts ENSG00000184900
Virus KSHV
Gene Type protein-coding
HPA Location Info Nucleoplasm, Nuclear bodies;Calyx, Connecting piece, Flagellar centriole;
Membrane Info Plasma proteins, Predicted intracellular proteins
Uniport_ID P55854
HGNC ID HGNC:11124
OMIM ID 602231
Summary This gene encodes a member of the small ubiquitin-related modifier (SUMO) family of eukaryotic proteins. The encoded protein is covalently conjugated to other proteins via a post-translation modification known as sumoylation. Sumoylation may play a role in a wide variety of cellular processes, including nuclear transport, DNA replication and repair, mitosis, transcriptional regulation, and signal transduction. Alternatively spliced transcript variants encoding distinct proteins have been described. [provided by RefSeq, Feb 2014]
Target gene [SUMO3] related to virus gene/protein/region

Mutation Table: if previous studies reported that target gene was related to virus gene/region/protein, the information in this literature was listed in this section


ID PMID Mutation Gene/Protein/Region Encoding Gene/Protein Disease Description Detail
1 23990779 H145L
RTA
ORF50
Cell line
R
T
 View

Target gene [SUMO3] related to Omics data
Data ID Experiment type Sample number Platform
GSE232843 RNA-seq 12 Illumina NovaSeq 6000 (Homo sapiens)
GSE79029 RNA-seq 6 Illumina HiSeq 2000 (Homo sapiens)
C
  GSE202670 		Chip-seq 14 Illumina Genome Analyzer (Homo sapiens)
E
  GSE280380 		RNA-seq 54 Illumina NovaSeq 6000 (Homo sapiens)
GSE158935 RNA-seq 6 Illumina HiSeq 2500 (Homo sapiens);Illumina NovaSeq 6000 (Homo sapiens)
C
  GSE132777 		Chip-seq 10 Illumina HiSeq 2000 (Homo sapiens);Illumina NextSeq 500 (Homo sapiens)
GSE147063 Chip-seq;GRO-seq;4C-seq 10 Illumina NextSeq 500 (Homo sapiens);Illumina Hiseq 2500 (Homo sapiens)
GSE207589 RNA-seq 12 Illumina HiSeq 2000 (Homo sapiens)
GSE241095 RNA-seq 44 Illumina HiSeq 4000 (Homo sapiens);Illumina NovaSeq 6000 (Homo sapiens)
C
  GSE135740 		Chip-seq 10 Illumina HiSeq 2000 (Homo sapiens);Illumina NextSeq 500 (Homo sapiens)
C
  GSE52421 		Chip-seq 18 Illumina Genome Analyzer IIx (Homo sapiens)
GSE280006 RNA-seq 14 NextSeq 550 (Homo sapiens)
C
  GSE38411 		Chip-seq 5 Illumina Genome Analyzer II (Homo sapiens);Illumina Genome Analyzer II (Human herpesvirus 8)
GSE260925 RNA-seq 24 Illumina NovaSeq 6000 (Homo sapiens)
C
  GSE56144 		Chip-seq;RNA-seq 33 Illumina Genome Analyzer II (Homo sapiens);Illumina HiSeq 2500 (Homo sapiens)


When the query gene is differentially changed in the dataset, a volcano/bar plot will be displayed.


> Dataset: GSE280380 - SUMO3 expression across samples

Volcano Plot

Bar Plot