HPV Target gene Detail Information

> USP54 Gene Search Result


Gene Information
Gene Name USP54
Gene ID 159195
Gene Full Name ubiquitin specific peptidase 54
Gene Alias C10orf29|bA137L10.3|bA137L10.4
Transcripts ENSG00000166348
Virus HPV
Gene Type protein-coding
HPA Location Info Mitochondria;
Membrane Info Enzymes, Predicted intracellular proteins
Uniport_ID Q70EL1
HGNC ID HGNC:23513
Summary Enables cysteine-type deubiquitinase activity. Predicted to be involved in protein deubiquitination and proteolysis. [provided by Alliance of Genome Resources, Apr 2025]
Target gene [USP54] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
5014717 chr10 15 5 0 20 View
5014718 chr10 1 0 0 1 View
5014719 chr10 100 32 16 148 View
5014720 chr10 7 14 0 21 View
5014721 chr10 183 17 5 205 View
5014722 chr10 54 8 1 63 View
5014723 chr10 12 11 0 23 View
5014724 chr10 6 1 0 7 View
5014725 chr10 4 2 6 12 View
5014726 chr10 5 4 0 9 View
5014727 chr10 3346 280 65 3691 View

Target gene [USP54] related to Omics data
Data ID Experiment type Sample number Platform
C
  GSE183048 		Chip-seq 24 Illumina HiSeq 4000 (Homo sapiens)
GSE40774 Expression array 134 Agilent-026652 Whole Human Genome Microarray 4x44K v2 (Probe Name version)
GSE169622 Methylation profiling (Array) 9 Infinium MethylationEPIC
GSE65858 Expression array 270 Illumina HumanHT-12 V4.0 expression beadchip
GSE181805 Expression array 25 [HTA-2_0] Affymetrix Human Transcriptome Array 2.0 [transcript (gene) version]
GSE196215 RNA-seq 8 Illumina NovaSeq 6000 (Homo sapiens)
GSE138080 Expression array 35 Agilent-014850 Whole Human Genome Microarray 4x44K G4112F (Feature Number version)
GSE140662 Expression array 8 [HTA-2_0] Affymetrix Human Transcriptome Array 2.0 [transcript (gene) version]
GSE55542 Expression array 36 Agilent-039494 SurePrint G3 Human GE v2 8x60K Microarray 039381 (Probe Name version)
C
  GSE143026 		ATAC-seq;Chip-seq;RNA-seq 30 Illumina HiSeq 2500 (Homo sapiens)
TCGA_CESC DNA methylation sequencing;RNA-seq 288 TCGA
GSE51993 Expression array 48 Illumina Human v2 MicroRNA expression beadchip;Illumina HumanHT-12 V4.0 expression beadchip
GSE197461 scRNA-seq 16 Illumina NovaSeq 6000 (Homo sapiens)
GSE55550 Expression array 155 Agilent-039494 SurePrint G3 Human GE v2 8x60K Microarray 039381 (Probe Name version)
GSE165883 RNA-seq 20 Illumina NextSeq 500 (Homo sapiens)


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE183048 - USP54 peak across samples

Peak Plot

> Dataset: GSE143026 - USP54 peak across samples

Peak Plot