HIV Target gene Detail Information

> ADGRE4P Gene Search Result


Gene Information
Gene Name ADGRE4P
Gene ID 326342
Gene Full Name adhesion G protein-coupled receptor E4, pseudogene
Gene Alias EMR4|EMR4P|FIRE|GPR127|PGR16
Virus HIV
Gene Type pseudo
HGNC ID HGNC:19240
OMIM ID 612305
Summary This gene is a member of the EGF-TM7 receptor gene family which is thought to play a role in leukocyte adhesion and migration. In other vertebrates, including nonhuman primates, this gene encodes a protein containing N-terminal EGF domains and a C-terminal transmembrane domain. Sequence evidence for the human gene, however, indicates nucleotide deletion in the genomic sequence would result in frameshift and early termination of translation. A protein expressed by this gene would be soluble rather than expressed on the cell surface. As the encoded protein has not been detected, this gene may represent a transcribed pseudogene. [provided by RefSeq, Aug 2008]
Target gene [ADGRE4P] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
4000302 chr19 24 448 93 565 View

Target gene [ADGRE4P] related to Omics data
Data ID Experiment type Sample number Platform
C
  GSE30738
Chip-seq 2 Illumina Genome Analyzer II (Homo sapiens)
GSE165708 RNA-seq 100 Illumina HiSeq 4000 (Homo sapiens)
GSE211651 Chip-seq;RNA-seq;PRO-seq 39 Illumina NextSeq 500 (Homo sapiens);Illumina NovaSeq 6000 (Homo sapiens)
GSE162914 RNA-seq 211 Illumina HiSeq 2500 (Homo sapiens)
C
  GSE221688
Chip-seq;scATAC-Seq;scRNA-Seq 12 Illumina NovaSeq 6000 (Homo sapiens)
GSE144332 RNA-seq 75 NextSeq 550 (Homo sapiens)
GSE68028 MeDIP-chip 1 NimbleGen Human DNA Methylation 2.1M Deluxe Promoter Array [100929_HG19_Deluxe_Prom_Meth_HX1]
GSE279982 Methylation profiling (Array) 576 Infinium MethylationEPIC
C
  GSE100376
ATAC-seq 24 Illumina NextSeq 500 (Homo sapiens)
C
  GSE165705
Chip-seq 30 Illumina NovaSeq 6000 (Homo sapiens)
GSE205204 RNA-seq 14 Illumina NovaSeq 6000 (Homo sapiens)
GSE246082 RNA-seq 6 Illumina HiSeq 4000 (Homo sapiens)
C
  GSE144329
ATAC-seq 96 NextSeq 550 (Homo sapiens)
C
  GSE165703
ATAC-seq 82 Illumina HiSeq 4000 (Homo sapiens)
C
  GSE100266
ATAC-seq;Chip-seq;RNA-seq 32 Illumina HiSeq 2500 (Homo sapiens)
GSE125686 RNA-seq 62 Illumina HiSeq 2000 (Homo sapiens);Illumina HiSeq 2500 (Homo sapiens);Illumina NextSeq 500 (Homo sapiens)
GSE164264 RNA-seq 6 BGISEQ-500 (Homo sapiens)


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE30738 - ADGRE4P peak across samples

Peak Plot


> Dataset: GSE221688 - ADGRE4P peak across samples

Peak Plot


> Dataset: GSE100376 - ADGRE4P peak across samples

Peak Plot


> Dataset: GSE165705 - ADGRE4P peak across samples

Peak Plot


> Dataset: GSE144329 - ADGRE4P peak across samples

Peak Plot


> Dataset: GSE165703 - ADGRE4P peak across samples

Peak Plot


> Dataset: GSE100266 - ADGRE4P peak across samples

Peak Plot