Virus Dataset Detail

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Dataset Information
Accession GSE68028
Status 2015/4/20
Title The alteration of DNA methylation driven by HIV infection based on a pair of monozygotic twins (MeDIP-chip)
Organism Homo sapiens
Experiment type Methylation profiling by genome tiling array
Summary In this study, we have investigated the relationship between genome-wide DNA methylation pattern and HIV infection using the methylated DNA immunoprecipitation - microarray method. A pair of monozygotic twins was recruited: one of the twins was infected with HIV while the other was not. The immunoprecipitated CpG-methylated DNA from HIV positive subject (test) and from HIV negative subject (input control) were labelled with Cy5 and Cy3 respectively
Samples
GSM ID Sample info Characteristics Description
GSM1661380 PBMC-HIV_infection cell type:Peripheral blood mononuclear cell; infection:HIV+ -
GSM1661380 PBMC-HIV_infection cell type:peripheral blood mononuclear cell; infection:HIV- -
Platform GPL16284  : NimbleGen Human DNA Methylation 2.1M Deluxe Promoter Array [100929_HG19_Deluxe_Prom_Meth_HX1]
Literature 26039376  26697319  
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