HPV Target gene Detail Information

> BIRC3 Gene Search Result


Gene Information
Gene Name BIRC3
Gene ID 330
Gene Full Name baculoviral IAP repeat containing 3
Gene Alias AIP1|API2|CIAP2|HAIP1|HIAP1|IAP-1|MALT2|MIHC|RNF49|c-IAP2
Transcripts ENSG00000023445
Virus HPV
Gene Type protein-coding
HPA Location Info Nucleoplasm, Cytosol;
Membrane Info Cancer-related genes, Disease related genes, Enzymes, Plasma proteins, Potential drug targets, Predicted intracellular proteins
Uniport_ID Q13489
HGNC ID HGNC:591
OMIM ID 601721
Summary This gene encodes a member of the IAP family of proteins that inhibit apoptosis by binding to tumor necrosis factor receptor-associated factors TRAF1 and TRAF2, probably by interfering with activation of ICE-like proteases. The encoded protein inhibits apoptosis induced by serum deprivation but does not affect apoptosis resulting from exposure to menadione, a potent inducer of free radicals. It contains 3 baculovirus IAP repeats and a ring finger domain. Transcript variants encoding the same isoform have been identified. [provided by RefSeq, Aug 2011]
Target gene [BIRC3] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
5000032 chr11 1915 2819 1738 6472 View
5000033 chr11 1834 2860 1770 6464 View
5000036 chr11 1665 2878 1787 6330 View
5001034 chr11 6 47 4 57 View
5001043 chr11 34 18 4 56 View
5001555 chr11 20 9 0 29 View
5001585 chr11 25 3 0 28 View
5001657 chr11 25 1 0 26 View
5001738 chr11 23 1 0 24 View
5001852 chr11 19 2 0 21 View
5002157 chr11 9 4 2 15 View
5002400 chr11 12 0 0 12 View
5002401 chr11 12 0 0 12 View

Target gene [BIRC3] related to Omics data
Data ID Experiment type Sample number Platform
GSE169622 Methylation profiling (Array) 9 Infinium MethylationEPIC
GSE181805 Expression array 25 [HTA-2_0] Affymetrix Human Transcriptome Array 2.0 [transcript (gene) version]
S
  GSE197461
scRNA-seq 16 Illumina NovaSeq 6000 (Homo sapiens)
GSE55550 Expression array 155 Agilent-039494 SurePrint G3 Human GE v2 8x60K Microarray 039381 (Probe Name version)
GSE199029 Variation;RNA-seq 44 NanoString Human nCounter PanCancer IO360 Panel
GSE165883 RNA-seq 20 Illumina NextSeq 500 (Homo sapiens)
C
  GSE183048
Chip-seq 24 Illumina HiSeq 4000 (Homo sapiens)
S
  GSE226620
scRNA-seq 30 HiSeq X Ten (Homo sapiens)
GSE40774 Expression array 134 Agilent-026652 Whole Human Genome Microarray 4x44K v2 (Probe Name version)
S
  GSE139324
scRNA-seq 63 Illumina NextSeq 500 (Homo sapiens)
GSE138080 Expression array 35 Agilent-014850 Whole Human Genome Microarray 4x44K G4112F (Feature Number version)
GSE140662 Expression array 8 [HTA-2_0] Affymetrix Human Transcriptome Array 2.0 [transcript (gene) version]
GSE65858 Expression array 270 Illumina HumanHT-12 V4.0 expression beadchip
GSE196215 RNA-seq 8 Illumina NovaSeq 6000 (Homo sapiens)
C
  GSE143026
ATAC-seq;Chip-seq;RNA-seq 30 Illumina HiSeq 2500 (Homo sapiens)
GSE51993 Expression array 48 Illumina Human v2 MicroRNA expression beadchip;Illumina HumanHT-12 V4.0 expression beadchip
S
  GSE164690
scRNA-seq 51 Illumina NextSeq 500 (Homo sapiens)
E
  GSE55542
Expression array 36 Agilent-039494 SurePrint G3 Human GE v2 8x60K Microarray 039381 (Probe Name version)
TCGA_CESC DNA methylation sequencing;RNA-seq 288 TCGA


When the query gene is differentially changed in the dataset, a volcano/bar plot will be displayed.


> Dataset: GSE55542 - BIRC3 expression across samples

Volcano Plot


Bar Plot