HIV Target gene Detail Information

> PRH1-PRR4 Gene Search Result


Gene Information
Gene Name PRH1-PRR4
Gene ID 100533464
Gene Full Name -
Gene Alias PRH1
Transcripts ENSG00000275778
Virus HIV
Gene Type ncRNA
HPA Location Info
Membrane Info Predicted intracellular proteins
Summary This locus represents naturally occurring read-through transcription between the neighboring PRH1 (proline-rich protein HaeIII subfamily 1) and PRR4 (proline rich 4, lacrimal) genes on chromosome 12. The read-through transcript is a candidate for nonsense-mediated mRNA decay (NMD), and is thus unlikely to produce a protein product. [provided by RefSeq, Feb 2011]
Target gene [PRH1-PRR4] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
4006507 chr12 17 7 0 24 View
4013571 chr12 1 1 1 3 View
4016489 chr12 0 0 0 0 View

Target gene [PRH1-PRR4] related to Omics data
Data ID Experiment type Sample number Platform
C
  GSE30738 		Chip-seq 2 Illumina Genome Analyzer II (Homo sapiens)
GSE262621 RNA-seq 70 Illumina NovaSeq 6000 (Homo sapiens)
GSE128121 RNA-seq 16 Illumina HiSeq 4000 (Homo sapiens)
C
  GSE211651 		Chip-seq;RNA-seq;PRO-seq 39 Illumina NextSeq 500 (Homo sapiens);Illumina NovaSeq 6000 (Homo sapiens)
GSE162914 RNA-seq 211 Illumina HiSeq 2500 (Homo sapiens)
GSE99737 RNA-seq 9 Illumina HiSeq 2500 (Homo sapiens)
GSE68028 MeDIP-chip 1 NimbleGen Human DNA Methylation 2.1M Deluxe Promoter Array [100929_HG19_Deluxe_Prom_Meth_HX1]
GSE279982 Methylation profiling (Array) 576 Infinium MethylationEPIC
C
  GSE100376 		ATAC-seq 24 Illumina NextSeq 500 (Homo sapiens)
C
  GSE144329 		ATAC-seq 96 NextSeq 550 (Homo sapiens)
GSE205204 RNA-seq 14 Illumina NovaSeq 6000 (Homo sapiens)
GSE246082 RNA-seq 6 Illumina HiSeq 4000 (Homo sapiens)
C
  GSE165703 		ATAC-seq 82 Illumina HiSeq 4000 (Homo sapiens)
GSE100266 ATAC-seq;Chip-seq;RNA-seq 32 Illumina HiSeq 2500 (Homo sapiens)
GSE125686 RNA-seq 62 Illumina HiSeq 2000 (Homo sapiens);Illumina HiSeq 2500 (Homo sapiens);Illumina NextSeq 500 (Homo sapiens)
GSE164264 RNA-seq 6 BGISEQ-500 (Homo sapiens)


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE30738 - PRH1-PRR4 peak across samples

Peak Plot

> Dataset: GSE211651 - PRH1-PRR4 peak across samples

Peak Plot

> Dataset: GSE100376 - PRH1-PRR4 peak across samples

Peak Plot

> Dataset: GSE144329 - PRH1-PRR4 peak across samples

Peak Plot

> Dataset: GSE165703 - PRH1-PRR4 peak across samples

Peak Plot