EBV Target gene Detail Information

> SUMO2 Gene Search Result


Gene Information
Gene Name SUMO2
Gene ID 6613
Gene Full Name small ubiquitin like modifier 2
Gene Alias HSMT3|SMT3B|SMT3H2|SUMO3|Smt3A
Transcripts ENSG00000188612
Virus EBV
Gene Type protein-coding
HPA Location Info Nucleoplasm, Nuclear bodies;Calyx, Connecting piece, Flagellar centriole;
Membrane Info Predicted intracellular proteins
Uniport_ID P61956
HGNC ID HGNC:11125
OMIM ID 603042
Summary This gene encodes a protein that is a member of the SUMO (small ubiquitin-like modifier) protein family. It functions in a manner similar to ubiquitin in that it is bound to target proteins as part of a post-translational modification system. However, unlike ubiquitin which targets proteins for degradation, this protein is involved in a variety of cellular processes, such as nuclear transport, transcriptional regulation, apoptosis, and protein stability. It is not active until the last two amino acids of the carboxy-terminus have been cleaved off. Numerous pseudogenes have been reported for this gene. Alternate transcriptional splice variants, encoding different isoforms, have been characterized. [provided by RefSeq, Jul 2008]
Target gene [SUMO2] related to virus gene/protein/region

Mutation Table: if previous studies reported that target gene was related to virus gene/region/protein, the information in this literature was listed in this section


ID PMID Mutation Gene/Protein/Region Encoding Gene/Protein Disease Description Detail
1 20516063 K12R
BZLF1
BZLF1
Cell line
T
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Target gene [SUMO2] related to Omics data
Data ID Experiment type Sample number Platform
GSE42867 Expression array 12 [HG-U133_Plus_2] Affymetrix Human Genome U133 Plus 2.0 Array
C
  GSE246060
Chip-seq 26 Illumina NovaSeq 6000 (Homo sapiens)
GSE45919 Expression array 24 Illumina HumanHT-12 V4.0 expression beadchip
GSE198332 Methylation profiling (Array) 7 Infinium MethylationEPIC
GSE223328 Expression array 16 Agilent-072363 SurePrint G3 Human GE v3 8x60K Microarray 039494 [Probe Name Version]
GSE208281 RNA-seq 50 Illumina NextSeq 500 (Homo sapiens)
GSE100458 Expression array 14 [HG-U133_Plus_2] Affymetrix Human Genome U133 Plus 2.0 Array [CDF: Brainarray HGU133Plus2_Hs_ENTREZG_v21]
C
  GSE198334
Chip-seq 4 Illumina NextSeq 500 (Homo sapiens)
GSE165194 RNA-seq 3 Illumina NextSeq 500 (Homo sapiens)
C
  GSE246059
ATAC-seq 8 Illumina NextSeq 500 (Homo sapiens);Illumina NovaSeq 6000 (Homo sapiens)
GSE177046 RNA-seq 6 Illumina HiSeq 2000 (Homo sapiens)
GSE135644 Expression array 10 Sentrix Human-6 v2 Expression BeadChip
C
  GSE225248
Chip-seq 12 Illumina NextSeq 500 (Homo sapiens)
GSE102203 Expression array 10 [HuGene-2_0-st] Affymetrix Human Gene 2.0 ST Array [probe set (exon) version]
GSE85599 Expression array 17 [HTA-2_0] Affymetrix Human Transcriptome Array 2.0 [transcript (gene) version]
GSE58240 Expression array 32 Illumina HumanHT-12 V4.0 expression beadchip
GSE181906 RNA-seq 24 Illumina NovaSeq 6000 (Homo sapiens)


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE246060 - SUMO2 peak across samples

Peak Plot


> Dataset: GSE198334 - SUMO2 peak across samples

Peak Plot


> Dataset: GSE246059 - SUMO2 peak across samples

Peak Plot


> Dataset: GSE225248 - SUMO2 peak across samples

Peak Plot