HIV Target gene Detail Information

> C8orf44-SGK3 Gene Search Result


Gene Information
Gene Name C8orf44-SGK3
Gene ID 100533105
Gene Full Name C8orf44-SGK3 readthrough
Gene Alias -
Transcripts ENSG00000288602
Virus HIV
Gene Type protein-coding
HPA Location Info Vesicles;Nucleoplasm;
Membrane Info Predicted intracellular proteins
HGNC ID HGNC:48354
Summary This locus represents naturally occurring read-through transcription between the neighboring putative uncharacterized protein C8orf44 (GeneID 56260) and serine/threonine-protein kinase Sgk3 (GeneID 23678) genes on chromosome 8. The read-through transcript produces a protein that shares sequence identity with the downstream gene product. [provided by RefSeq, Feb 2011]
Target gene [C8orf44-SGK3] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
4013745 chr8 3 0 0 3 View

Target gene [C8orf44-SGK3] related to Omics data
Data ID Experiment type Sample number Platform
C
  GSE30738 		Chip-seq 2 Illumina Genome Analyzer II (Homo sapiens)
GSE262621 RNA-seq 70 Illumina NovaSeq 6000 (Homo sapiens)
C
  GSE220859 		Chip-seq 11 Illumina NovaSeq 6000 (Homo sapiens)
C
  GSE211651 		Chip-seq;RNA-seq;PRO-seq 39 Illumina NextSeq 500 (Homo sapiens);Illumina NovaSeq 6000 (Homo sapiens)
GSE162914 RNA-seq 211 Illumina HiSeq 2500 (Homo sapiens)
C
  GSE221688 		Chip-seq;scATAC-Seq;scRNA-Seq 12 Illumina NovaSeq 6000 (Homo sapiens)
GSE99737 RNA-seq 9 Illumina HiSeq 2500 (Homo sapiens)
GSE68028 MeDIP-chip 1 NimbleGen Human DNA Methylation 2.1M Deluxe Promoter Array [100929_HG19_Deluxe_Prom_Meth_HX1]
GSE279982 Methylation profiling (Array) 576 Infinium MethylationEPIC
C
  GSE100376 		ATAC-seq 24 Illumina NextSeq 500 (Homo sapiens)
C
  GSE165705 		Chip-seq 30 Illumina NovaSeq 6000 (Homo sapiens)
GSE205204 RNA-seq 14 Illumina NovaSeq 6000 (Homo sapiens)
GSE246082 RNA-seq 6 Illumina HiSeq 4000 (Homo sapiens)
C
  GSE144329 		ATAC-seq 96 NextSeq 550 (Homo sapiens)
C
  GSE165703 		ATAC-seq 82 Illumina HiSeq 4000 (Homo sapiens)
C
  GSE100266 		ATAC-seq;Chip-seq;RNA-seq 32 Illumina HiSeq 2500 (Homo sapiens)
GSE125686 RNA-seq 62 Illumina HiSeq 2000 (Homo sapiens);Illumina HiSeq 2500 (Homo sapiens);Illumina NextSeq 500 (Homo sapiens)
GSE164264 RNA-seq 6 BGISEQ-500 (Homo sapiens)


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE30738 - C8orf44-SGK3 peak across samples

Peak Plot

> Dataset: GSE220859 - C8orf44-SGK3 peak across samples

Peak Plot

> Dataset: GSE211651 - C8orf44-SGK3 peak across samples

Peak Plot

> Dataset: GSE221688 - C8orf44-SGK3 peak across samples

Peak Plot

> Dataset: GSE100376 - C8orf44-SGK3 peak across samples

Peak Plot

> Dataset: GSE165705 - C8orf44-SGK3 peak across samples

Peak Plot

> Dataset: GSE144329 - C8orf44-SGK3 peak across samples

Peak Plot

> Dataset: GSE165703 - C8orf44-SGK3 peak across samples

Peak Plot

> Dataset: GSE100266 - C8orf44-SGK3 peak across samples

Peak Plot