HIV Target gene Detail Information

> FERRY3 Gene Search Result


Gene Information
Gene Name FERRY3
Gene ID 57102
Gene Full Name FERRY endosomal RAB5 effector complex subunit 3
Gene Alias C12orf4|Fy-3|MRT66
Transcripts ENSG00000047621
Virus HIV
Gene Type protein-coding
HPA Location Info Nuclear bodies;
Membrane Info Disease related genes, Human disease related genes, Predicted intracellular proteins
Uniport_ID Q9NQ89
HGNC ID HGNC:1184
OMIM ID 616082
Summary This gene is highly conserved from nematodes to humans. In rat, the orthologous gene encodes a cytoplasmic protein that is involved in mast cell degranulation. The human gene has been implicated in autosomal recessive intellectual disability. [provided by RefSeq, Sep 2016]
Target gene [FERRY3] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
4002717 chr12 76 3 3 82 View
4013517 chr12 1 2 0 3 View

Target gene [FERRY3] related to Omics data
Data ID Experiment type Sample number Platform
C
  GSE30738 		Chip-seq 2 Illumina Genome Analyzer II (Homo sapiens)
C
  GSE220859 		Chip-seq 11 Illumina NovaSeq 6000 (Homo sapiens)
GSE128121 RNA-seq 16 Illumina HiSeq 4000 (Homo sapiens)
C
  GSE211651 		Chip-seq;RNA-seq;PRO-seq 39 Illumina NextSeq 500 (Homo sapiens);Illumina NovaSeq 6000 (Homo sapiens)
GSE162914 RNA-seq 211 Illumina HiSeq 2500 (Homo sapiens)
C
  GSE221688 		Chip-seq;scATAC-Seq;scRNA-Seq 12 Illumina NovaSeq 6000 (Homo sapiens)
GSE144332 RNA-seq 75 NextSeq 550 (Homo sapiens)
GSE68028 MeDIP-chip 1 NimbleGen Human DNA Methylation 2.1M Deluxe Promoter Array [100929_HG19_Deluxe_Prom_Meth_HX1]
C
  GSE100376 		ATAC-seq 24 Illumina NextSeq 500 (Homo sapiens)
C
  GSE165705 		Chip-seq 30 Illumina NovaSeq 6000 (Homo sapiens)
C
  GSE144329 		ATAC-seq 96 NextSeq 550 (Homo sapiens)
GSE205204 RNA-seq 14 Illumina NovaSeq 6000 (Homo sapiens)
GSE167211 RNA-seq 1 Illumina HiSeq 2000 (Homo sapiens)
GSE246082 RNA-seq 6 Illumina HiSeq 4000 (Homo sapiens)
C
  GSE165703 		ATAC-seq 82 Illumina HiSeq 4000 (Homo sapiens)
C
  GSE100266 		ATAC-seq;Chip-seq;RNA-seq 32 Illumina HiSeq 2500 (Homo sapiens)
GSE125686 RNA-seq 62 Illumina HiSeq 2000 (Homo sapiens);Illumina HiSeq 2500 (Homo sapiens);Illumina NextSeq 500 (Homo sapiens)
GSE164264 RNA-seq 6 BGISEQ-500 (Homo sapiens)


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE30738 - FERRY3 peak across samples

Peak Plot

> Dataset: GSE220859 - FERRY3 peak across samples

Peak Plot

> Dataset: GSE211651 - FERRY3 peak across samples

Peak Plot

> Dataset: GSE221688 - FERRY3 peak across samples

Peak Plot

> Dataset: GSE100376 - FERRY3 peak across samples

Peak Plot

> Dataset: GSE165705 - FERRY3 peak across samples

Peak Plot

> Dataset: GSE144329 - FERRY3 peak across samples

Peak Plot

> Dataset: GSE165703 - FERRY3 peak across samples

Peak Plot

> Dataset: GSE100266 - FERRY3 peak across samples

Peak Plot