EBV Target gene Detail Information

> FREM2 Gene Search Result


Gene Information
Gene Name FREM2
Gene ID 341640
Gene Full Name FRAS1 related extracellular matrix 2
Gene Alias CRYPTOP|FRASRS2
Transcripts ENSG00000150893
Virus EBV
Gene Type protein-coding
HPA Location Info Cytosol;
Membrane Info Disease related genes, Human disease related genes, Predicted membrane proteins
Uniport_ID Q5SZK8
HGNC ID HGNC:25396
OMIM ID 608945
Summary This gene encodes an integral membrane protein containing numerous CSPG (chondroitin sulfate proteoglycan element) repeats and Calx-beta domains. The encoded protein localizes to the basement membrane, forming a ternary complex that plays a role in epidermal-dermal interactions. This protein is important for the integrity of skin and renal epithelia. Mutations in this gene are associated with Fraser syndrome. [provided by RefSeq, Apr 2014]
Target gene [FREM2] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
3000488 chr13 13 2 0 15 View

Target gene [FREM2] related to Omics data
Data ID Experiment type Sample number Platform
GSE42867 Expression array 12 [HG-U133_Plus_2] Affymetrix Human Genome U133 Plus 2.0 Array
C
  GSE246060
Chip-seq 26 Illumina NovaSeq 6000 (Homo sapiens)
GSE45919 Expression array 24 Illumina HumanHT-12 V4.0 expression beadchip
GSE198332 Methylation profiling (Array) 7 Infinium MethylationEPIC
GSE223328 Expression array 16 Agilent-072363 SurePrint G3 Human GE v3 8x60K Microarray 039494 [Probe Name Version]
GSE208281 RNA-seq 50 Illumina NextSeq 500 (Homo sapiens)
GSE100458 Expression array 14 [HG-U133_Plus_2] Affymetrix Human Genome U133 Plus 2.0 Array [CDF: Brainarray HGU133Plus2_Hs_ENTREZG_v21]
GSE165194 RNA-seq 3 Illumina NextSeq 500 (Homo sapiens)
C
  GSE246059
ATAC-seq 8 Illumina NextSeq 500 (Homo sapiens);Illumina NovaSeq 6000 (Homo sapiens)
GSE177046 RNA-seq 6 Illumina HiSeq 2000 (Homo sapiens)
GSE135644 Expression array 10 Sentrix Human-6 v2 Expression BeadChip
C
  GSE225248
Chip-seq 12 Illumina NextSeq 500 (Homo sapiens)
GSE102203 Expression array 10 [HuGene-2_0-st] Affymetrix Human Gene 2.0 ST Array [probe set (exon) version]
GSE85599 Expression array 17 [HTA-2_0] Affymetrix Human Transcriptome Array 2.0 [transcript (gene) version]
GSE12452 Expression array 41 [HG-U133_Plus_2] Affymetrix Human Genome U133 Plus 2.0 Array
GSE58240 Expression array 32 Illumina HumanHT-12 V4.0 expression beadchip
GSE181906 RNA-seq 24 Illumina NovaSeq 6000 (Homo sapiens)


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE246060 - FREM2 peak across samples

Peak Plot


> Dataset: GSE246059 - FREM2 peak across samples

Peak Plot


> Dataset: GSE225248 - FREM2 peak across samples

Peak Plot