HIV Target gene Detail Information

> LOC374443 Gene Search Result


Gene Information
Gene Name LOC374443
Gene ID 374443
Gene Full Name -
Gene Alias -
Transcripts ENSG00000284634
Virus HIV
Gene Type pseudo
Target gene [LOC374443] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
4003843 chr12 50 3 0 53 View
4007183 chr12 20 0 0 20 View
4009321 chr12 9 3 0 12 View
4013147 chr12 2 0 2 4 View
4014350 chr12 1 0 1 2 View
4015597 chr12 1 0 0 1 View

Target gene [LOC374443] related to Omics data
Data ID Experiment type Sample number Platform
C
  GSE30738 		Chip-seq 2 Illumina Genome Analyzer II (Homo sapiens)
C
  GSE220859 		Chip-seq 11 Illumina NovaSeq 6000 (Homo sapiens)
C
  GSE211651 		Chip-seq;RNA-seq;PRO-seq 39 Illumina NextSeq 500 (Homo sapiens);Illumina NovaSeq 6000 (Homo sapiens)
GSE162914 RNA-seq 211 Illumina HiSeq 2500 (Homo sapiens)
C
  GSE221688 		Chip-seq;scATAC-Seq;scRNA-Seq 12 Illumina NovaSeq 6000 (Homo sapiens)
GSE99737 RNA-seq 9 Illumina HiSeq 2500 (Homo sapiens)
GSE68028 MeDIP-chip 1 NimbleGen Human DNA Methylation 2.1M Deluxe Promoter Array [100929_HG19_Deluxe_Prom_Meth_HX1]
GSE279982 Methylation profiling (Array) 576 Infinium MethylationEPIC
C
  GSE100376 		ATAC-seq 24 Illumina NextSeq 500 (Homo sapiens)
C
  GSE165705 		Chip-seq 30 Illumina NovaSeq 6000 (Homo sapiens)
GSE205204 RNA-seq 14 Illumina NovaSeq 6000 (Homo sapiens)
GSE246082 RNA-seq 6 Illumina HiSeq 4000 (Homo sapiens)
GSE165132 RNA-seq 56 NextSeq 550 (Homo sapiens)
C
  GSE144329 		ATAC-seq 96 NextSeq 550 (Homo sapiens)
C
  GSE100266 		ATAC-seq;Chip-seq;RNA-seq 32 Illumina HiSeq 2500 (Homo sapiens)
C
  GSE165703 		ATAC-seq 82 Illumina HiSeq 4000 (Homo sapiens)
GSE125686 RNA-seq 62 Illumina HiSeq 2000 (Homo sapiens);Illumina HiSeq 2500 (Homo sapiens);Illumina NextSeq 500 (Homo sapiens)
GSE164264 RNA-seq 6 BGISEQ-500 (Homo sapiens)


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE30738 - LOC374443 peak across samples

Peak Plot

> Dataset: GSE220859 - LOC374443 peak across samples

Peak Plot

> Dataset: GSE211651 - LOC374443 peak across samples

Peak Plot

> Dataset: GSE221688 - LOC374443 peak across samples

Peak Plot

> Dataset: GSE100376 - LOC374443 peak across samples

Peak Plot

> Dataset: GSE165705 - LOC374443 peak across samples

Peak Plot

> Dataset: GSE144329 - LOC374443 peak across samples

Peak Plot

> Dataset: GSE100266 - LOC374443 peak across samples

Peak Plot

> Dataset: GSE165703 - LOC374443 peak across samples

Peak Plot