HIV Target gene Detail Information

> ABCA11P Gene Search Result


Gene Information
Gene Name ABCA11P
Gene ID 79963
Gene Full Name ATP binding cassette subfamily A member 11, pseudogene
Gene Alias ABCA11|EST1133530
Transcripts ENSG00000293360
Virus HIV
Gene Type pseudo
HGNC ID HGNC:31
Target gene [ABCA11P] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
4014469 chr4 1 1 0 2 View
4015845 chr4 0 0 0 0 View
4015846 chr4 0 0 0 0 View
4015847 chr4 0 0 0 0 View
4015848 chr4 0 0 0 0 View
4015849 chr4 0 0 0 0 View
4015850 chr4 0 0 0 0 View
4015851 chr4 0 0 0 0 View
4015852 chr4 0 0 0 0 View
4015853 chr4 0 0 0 0 View
4015854 chr4 0 0 0 0 View
4015855 chr4 0 0 0 0 View
4015856 chr4 0 0 0 0 View
4015857 chr4 0 0 0 0 View
4015858 chr4 0 0 0 0 View
4015859 chr4 0 0 0 0 View
4015860 chr4 0 0 0 0 View
4015861 chr4 0 0 0 0 View
4015862 chr4 0 0 0 0 View
4015863 chr4 0 0 0 0 View
4015864 chr4 0 0 0 0 View
4016824 chr4 20 0 0 20 View
4017028 chr4 20 0 0 20 View
4017031 chr4 0 2 1 3 View

Target gene [ABCA11P] related to Omics data
Data ID Experiment type Sample number Platform
C
  GSE221688 		Chip-seq;scATAC-Seq;scRNA-Seq 12 Illumina NovaSeq 6000 (Homo sapiens)
GSE99737 RNA-seq 9 Illumina HiSeq 2500 (Homo sapiens)
GSE144332 RNA-seq 75 NextSeq 550 (Homo sapiens)
C
  GSE165705 		Chip-seq 30 Illumina NovaSeq 6000 (Homo sapiens)
GSE164264 RNA-seq 6 BGISEQ-500 (Homo sapiens)
GSE262621 RNA-seq 70 Illumina NovaSeq 6000 (Homo sapiens)
GSE162914 RNA-seq 211 Illumina HiSeq 2500 (Homo sapiens)
GSE279982 Methylation profiling (Array) 576 Infinium MethylationEPIC
C
  GSE144329 		ATAC-seq 96 NextSeq 550 (Homo sapiens)
GSE205204 RNA-seq 14 Illumina NovaSeq 6000 (Homo sapiens)
GSE125686 RNA-seq 62 Illumina HiSeq 2000 (Homo sapiens);Illumina HiSeq 2500 (Homo sapiens);Illumina NextSeq 500 (Homo sapiens)
C
  GSE220859 		Chip-seq 11 Illumina NovaSeq 6000 (Homo sapiens)
GSE165708 RNA-seq 100 Illumina HiSeq 4000 (Homo sapiens)
C
  GSE211651 		Chip-seq;RNA-seq;PRO-seq 39 Illumina NextSeq 500 (Homo sapiens);Illumina NovaSeq 6000 (Homo sapiens)
GSE68028 MeDIP-chip 1 NimbleGen Human DNA Methylation 2.1M Deluxe Promoter Array [100929_HG19_Deluxe_Prom_Meth_HX1]
C
  GSE100376 		ATAC-seq 24 Illumina NextSeq 500 (Homo sapiens)
GSE165132 RNA-seq 56 NextSeq 550 (Homo sapiens)
C
  GSE100266 		ATAC-seq;Chip-seq;RNA-seq 32 Illumina HiSeq 2500 (Homo sapiens)
GSE246082 RNA-seq 6 Illumina HiSeq 4000 (Homo sapiens)


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE221688 - ABCA11P peak across samples

Peak Plot

> Dataset: GSE165705 - ABCA11P peak across samples

Peak Plot

> Dataset: GSE144329 - ABCA11P peak across samples

Peak Plot

> Dataset: GSE220859 - ABCA11P peak across samples

Peak Plot

> Dataset: GSE211651 - ABCA11P peak across samples

Peak Plot

> Dataset: GSE100376 - ABCA11P peak across samples

Peak Plot

> Dataset: GSE100266 - ABCA11P peak across samples

Peak Plot