HCMV Target gene Detail Information

> CCL13 Gene Search Result


Gene Information
Gene Name CCL13
Gene ID 6357
Gene Full Name C-C motif chemokine ligand 13
Gene Alias CKb10|MCP-4|NCC-1|NCC1|SCYA13|SCYL1
Transcripts ENSG00000181374
Virus HCMV
Gene Type protein-coding
HPA Location Info Secreted to blood;
Membrane Info Cancer-related genes, Predicted intracellular proteins, Predicted secreted proteins
Uniport_ID Q99616
HGNC ID HGNC:10611
OMIM ID 601391
Summary This antimicrobial gene is one of several Cys-Cys (CC) cytokine genes clustered on the q-arm of chromosome 17. Cytokines are a family of secreted proteins involved in immunoregulatory and inflammatory processes. The CC cytokines are proteins characterized by two adjacent cysteines. The cytokine encoded by this gene displays chemotactic activity for monocytes, lymphocytes, basophils and eosinophils, but not neutrophils. This chemokine plays a role in accumulation of leukocytes during inflammation. It may also be involved in the recruitment of monocytes into the arterial wall during artherosclerosis. [provided by RefSeq, Sep 2014]
Target gene [CCL13] related to virus gene/protein/region

Mutation Table: if previous studies reported that target gene was related to virus gene/region/protein, the information in this literature was listed in this section


ID PMID Mutation Gene/Protein/Region Encoding Gene/Protein Disease Description Detail
1 34704798 A19D
US28
US28
Cytomegalovirus infections
R
L
T
 View

Target gene [CCL13] related to Omics data
Data ID Experiment type Sample number Platform
GSE152114 RNA-seq 4 Illumina HiSeq 2000 (Homo sapiens)
GSE254735 RNA-seq 4 Illumina NovaSeq 6000 (Homo sapiens)
GSE136217 RNA-seq 7 Illumina NextSeq 500 (Homo sapiens);Illumina NextSeq 500 (Homo sapiens; Human betaherpesvirus 5)
GSE73853 RNA-seq 13 Illumina HiSeq 2000 (Homo sapiens)
GSE280380 RNA-seq 54 Illumina NovaSeq 6000 (Homo sapiens)
GSE163707 RNA-seq 96 Illumina NextSeq 500 (Homo sapiens);Illumina NextSeq 500 (blank sample)
GSE217832 RNA-seq 8 Illumina NextSeq 500 (Homo sapiens)
GSE168598 RNA-seq 154 Illumina HiSeq 3000 (Homo sapiens)
GSE182788 RNA-seq 4 Illumina HiSeq 2000 (Homo sapiens)
C
  GSE164861 		Chip-seq;RNA-seq;ATAC-seq 79 Illumina NextSeq 500 (Homo sapiens);Illumina HiSeq 4000 (Homo sapiens);Illumina NextSeq 500 (Homo sapiens; Human betaherpesvirus 5);Illumina HiSeq 4000 (Human betaherpesvirus 5);Illumina NovaSeq 6000 (Human betaherpesvirus 5);Illumina HiSeq 4000 (Homo sapiens; Human betaherpesvirus 5)
C
  GSE53271 		Chip-seq 2 Illumina HiSeq 2000 (Homo sapiens)
GSE164843 RNA-seq 10 Illumina NextSeq 500 (Homo sapiens);Illumina NextSeq 500 (Homo sapiens; Human betaherpesvirus 5)
GSE164839 RNA-seq 4 Illumina NextSeq 500 (Homo sapiens);Illumina NextSeq 500 (Homo sapiens; Human betaherpesvirus 5)
C
  GSE185618 		Chip-seq 25 Illumina HiSeq 4000 (Homo sapiens);Illumina NovaSeq 6000 (Homo sapiens)
C
  GSE254741 		ATAC-seq;ChIP-seq;HiChIP;RNA-seq 30 Illumina NovaSeq 6000 (Homo sapiens)
GSE248772 RNA-seq 84 Illumina NovaSeq 6000 (Homo sapiens)
GSE193759 RNA-seq 12 Illumina HiSeq 2000 (Homo sapiens);Illumina HiSeq 2000 (Homo sapiens; Human betaherpesvirus 5)
GSE94724 RNA-seq 4 Illumina HiSeq 2000 (Homo sapiens)


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE164861 - CCL13 peak across samples

Peak Plot

> Dataset: GSE53271 - CCL13 peak across samples

Peak Plot

> Dataset: GSE185618 - CCL13 peak across samples

Peak Plot

> Dataset: GSE254741 - CCL13 peak across samples

Peak Plot