Virus Dataset Detail

> Detail information for each sample

Dataset Information
Accession GSE248772
Status 2023/12/14
Title Transcriptome profiling of human cytomegalovirus-infected trophoblasts
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary Placental infection plays a central role in the pathogenesis of congenital human cytomegalovirus (HCMV) infections and is a cause of fetal growth restriction and pregnancy loss. HCMV can replicate in some trophoblast cell types, but it remains unclear how the virus evades antiviral immunity in the placenta and how infection compromises placental development and function. Human trophoblast stem cells (TSCs) can be differentiated into extravillous trophoblasts (EVTs) and syncytiotrophoblasts (STBs). This study assessed the utility of TSCs as a model of HCMV infection in the first trimester placenta. TSCs and TSC-derived EVTs and STBs were infected with HCMV (TB40/Ewt-mCherry). RNA was isolated from infected cells at 24, 48, and 72 hours post-infection and Illumina RNA-Sequencing was used to measure viral and host gene expression. Viral gene expression in TSCs does not follow the kinetic patterns observed during lytic infection in fibroblasts. Canonical antiviral responses were largely not observed in HCMV-infected TSCs and TSC-derived trophoblasts. Rather, infection dysregulated factors involved in cell identity, differentiation, and WNT signaling.
Samples
GSM ID Sample info Characteristics Description
GSM7919638 CT27 Mock A 24 HPI cell line:CT27; cell type:Trophoblast Stem Cells; genotype:WT; treatment:Mock 24 HPI 27_MA_24;Bierle_Project_013_raw_Gencode_v38_counts.csv;Bierle_Project_013_raw_EF999921.1_counts.csv
GSM7919639 CT27 Mock B 24 HPI cell line:CT27; cell type:Trophoblast Stem Cells; genotype:WT; treatment:Mock 24 HPI 27_MB_24;Bierle_Project_013_raw_Gencode_v38_counts.csv;Bierle_Project_013_raw_EF999921.1_counts.csv
GSM7919640 CT29 Mock A 24 HPI cell line:CT29; cell type:Trophoblast Stem Cells; genotype:WT; treatment:Mock 24 HPI 29_MA_24;Bierle_Project_013_raw_Gencode_v38_counts.csv;Bierle_Project_013_raw_EF999921.1_counts.csv
GSM7919641 CT29 Mock B 24 HPI cell line:CT29; cell type:Trophoblast Stem Cells; genotype:WT; treatment:Mock 24 HPI 29_MB_24;Bierle_Project_013_raw_Gencode_v38_counts.csv;Bierle_Project_013_raw_EF999921.1_counts.csv
GSM7919642 CT27 mCherry high A 24 HPI cell line:CT27; cell type:Trophoblast Stem Cells; genotype:WT; treatment:Infected 24 HPI mCherry high 27_HAH_24;Bierle_Project_013_raw_Gencode_v38_counts.csv;Bierle_Project_013_raw_EF999921.1_counts.csv
GSM7919691 CT27 STB Mock B 72 HPI cell line:CT27; cell type:Syncytiotrophoblast; genotype:WT; treatment:Mock 72 HPI 18_27_STB_72_M_B;Bierle_Project_014_raw_Gencode_v38_counts.csv;Bierle_Project_014_raw_EF999921.1_counts.csv
GSM7919643 CT27 mCherry low A 24 HPI cell line:CT27; cell type:Trophoblast Stem Cells; genotype:WT; treatment:Infected 24 HPI mCherry low 27_HAL_24;Bierle_Project_013_raw_Gencode_v38_counts.csv;Bierle_Project_013_raw_EF999921.1_counts.csv
GSM7919692 CT27 STB CMV A 72 HPI cell line:CT27; cell type:Syncytiotrophoblast; genotype:WT; treatment:Infected 72 HPI 19_27_STB_72_C_A;Bierle_Project_014_raw_Gencode_v38_counts.csv;Bierle_Project_014_raw_EF999921.1_counts.csv
GSM7919644 CT27 mCherry high B 24 HPI cell line:CT27; cell type:Trophoblast Stem Cells; genotype:WT; treatment:Infected 24 HPI mCherry high 27_HBH_24;Bierle_Project_013_raw_Gencode_v38_counts.csv;Bierle_Project_013_raw_EF999921.1_counts.csv
GSM7919693 CT27 STB CMV B 72 HPI cell line:CT27; cell type:Syncytiotrophoblast; genotype:WT; treatment:Infected 72 HPI 20_27_STB_72_C_B;Bierle_Project_014_raw_Gencode_v38_counts.csv;Bierle_Project_014_raw_EF999921.1_counts.csv
GSM7919645 CT27 mCherry low B 24 HPI cell line:CT27; cell type:Trophoblast Stem Cells; genotype:WT; treatment:Infected 24 HPI mCherry low 27_HBL_24;Bierle_Project_013_raw_Gencode_v38_counts.csv;Bierle_Project_013_raw_EF999921.1_counts.csv
GSM7919694 CT29 STB Mock A 72 HPI cell line:CT29; cell type:Syncytiotrophoblast; genotype:WT; treatment:Mock 72 HPI 21_29_STB_72_M_A;Bierle_Project_014_raw_Gencode_v38_counts.csv;Bierle_Project_014_raw_EF999921.1_counts.csv
GSM7919646 CT29 mCherry high A 24 HPI cell line:CT29; cell type:Trophoblast Stem Cells; genotype:WT; treatment:Infected 24 HPI mCherry high 29_HAH_24;Bierle_Project_013_raw_Gencode_v38_counts.csv;Bierle_Project_013_raw_EF999921.1_counts.csv
GSM7919695 CT29 STB Mock B 72 HPI cell line:CT29; cell type:Syncytiotrophoblast; genotype:WT; treatment:Mock 72 HPI 22_29_STB_72_M_B;Bierle_Project_014_raw_Gencode_v38_counts.csv;Bierle_Project_014_raw_EF999921.1_counts.csv
GSM7919696 CT29 STB CMV A 72 HPI cell line:CT29; cell type:Syncytiotrophoblast; genotype:WT; treatment:Infected 72 HPI 23_29_STB_72_C_A;Bierle_Project_014_raw_Gencode_v38_counts.csv;Bierle_Project_014_raw_EF999921.1_counts.csv
GSM7919647 CT29 mCherry low A 24 HPI cell line:CT29; cell type:Trophoblast Stem Cells; genotype:WT; treatment:Infected 24 HPI mCherry low 29_HAL_24;Bierle_Project_013_raw_Gencode_v38_counts.csv;Bierle_Project_013_raw_EF999921.1_counts.csv
GSM7919697 CT29 STB CMV B 72 HPI cell line:CT29; cell type:Syncytiotrophoblast; genotype:WT; treatment:Infected 72 HPI 24_29_STB_72_C_B;Bierle_Project_014_raw_Gencode_v38_counts.csv;Bierle_Project_014_raw_EF999921.1_counts.csv
GSM7919648 CT29 mCherry high B 24 HPI cell line:CT29; cell type:Trophoblast Stem Cells; genotype:WT; treatment:Infected 24 HPI mCherry high 29_HBH_24;Bierle_Project_013_raw_Gencode_v38_counts.csv;Bierle_Project_013_raw_EF999921.1_counts.csv
GSM7919698 CT27 EVT Mock A 24 HPI cell line:CT27; cell type:Extravillous trophoblasts; genotype:WT; treatment:Mock 24 HPI 1_27_EVT_24_M_A;Bierle_Project_014_raw_Gencode_v38_counts.csv;Bierle_Project_014_raw_EF999921.1_counts.csv
GSM7919649 CT29 mCherry low B 24 HPI cell line:CT29; cell type:Trophoblast Stem Cells; genotype:WT; treatment:Infected 24 HPI mCherry low 29_HBL_24;Bierle_Project_013_raw_Gencode_v38_counts.csv;Bierle_Project_013_raw_EF999921.1_counts.csv
GSM7919699 CT27 EVT Mock B 24 HPI cell line:CT27; cell type:Extravillous trophoblasts; genotype:WT; treatment:Mock 24 HPI 2_27_EVT_24_M_B;Bierle_Project_014_raw_Gencode_v38_counts.csv;Bierle_Project_014_raw_EF999921.1_counts.csv
GSM7919650 CT27 Mock A 48 HPI cell line:CT27; cell type:Trophoblast Stem Cells; genotype:WT; treatment:Mock 48 HPI 27_MA_48;Bierle_Project_013_raw_Gencode_v38_counts.csv;Bierle_Project_013_raw_EF999921.1_counts.csv
GSM7919700 CT27 EVT CMV A 24 HPI cell line:CT27; cell type:Extravillous trophoblasts; genotype:WT; treatment:Infected 24 HPI 3_27_EVT_24_C_A;Bierle_Project_014_raw_Gencode_v38_counts.csv;Bierle_Project_014_raw_EF999921.1_counts.csv
GSM7919651 CT27 Mock B 48 HPI cell line:CT27; cell type:Trophoblast Stem Cells; genotype:WT; treatment:Mock 48 HPI 27_MB_48;Bierle_Project_013_raw_Gencode_v38_counts.csv;Bierle_Project_013_raw_EF999921.1_counts.csv
GSM7919701 CT27 EVT CMV B 24 HPI cell line:CT27; cell type:Extravillous trophoblasts; genotype:WT; treatment:Infected 24 HPI 4_27_EVT_24_C_B;Bierle_Project_014_raw_Gencode_v38_counts.csv;Bierle_Project_014_raw_EF999921.1_counts.csv
GSM7919652 CT29 Mock A 48 HPI cell line:CT29; cell type:Trophoblast Stem Cells; genotype:WT; treatment:Mock 48 HPI 29_MA_48;Bierle_Project_013_raw_Gencode_v38_counts.csv;Bierle_Project_013_raw_EF999921.1_counts.csv
GSM7919702 CT29 EVT Mock A 24 HPI cell line:CT29; cell type:Extravillous trophoblasts; genotype:WT; treatment:Mock 24 HPI 5_29_EVT_24_M_A;Bierle_Project_014_raw_Gencode_v38_counts.csv;Bierle_Project_014_raw_EF999921.1_counts.csv
GSM7919653 CT29 Mock B 48 HPI cell line:CT29; cell type:Trophoblast Stem Cells; genotype:WT; treatment:Mock 48 HPI 29_MB_48;Bierle_Project_013_raw_Gencode_v38_counts.csv;Bierle_Project_013_raw_EF999921.1_counts.csv
GSM7919703 CT29 EVT Mock B 24 HPI cell line:CT29; cell type:Extravillous trophoblasts; genotype:WT; treatment:Mock 24 HPI 6_29_EVT_24_M_B;Bierle_Project_014_raw_Gencode_v38_counts.csv;Bierle_Project_014_raw_EF999921.1_counts.csv
GSM7919654 CT27 mCherry high A 48 HPI cell line:CT27; cell type:Trophoblast Stem Cells; genotype:WT; treatment:Infected 48 HPI mCherry high 27_HAH_48;Bierle_Project_013_raw_Gencode_v38_counts.csv;Bierle_Project_013_raw_EF999921.1_counts.csv
GSM7919704 CT29 EVT CMV A 24 HPI cell line:CT29; cell type:Extravillous trophoblasts; genotype:WT; treatment:Infected 24 HPI 7_29_EVT_24_C_A;Bierle_Project_014_raw_Gencode_v38_counts.csv;Bierle_Project_014_raw_EF999921.1_counts.csv
GSM7919655 CT27 mCherry low A 48 HPI cell line:CT27; cell type:Trophoblast Stem Cells; genotype:WT; treatment:Infected 48 HPI mCherry low 27_HAL_48;Bierle_Project_013_raw_Gencode_v38_counts.csv;Bierle_Project_013_raw_EF999921.1_counts.csv
GSM7919705 CT29 EVT CMV B 24 HPI cell line:CT29; cell type:Extravillous trophoblasts; genotype:WT; treatment:Infected 24 HPI 8_29_EVT_24_C_B;Bierle_Project_014_raw_Gencode_v38_counts.csv;Bierle_Project_014_raw_EF999921.1_counts.csv
GSM7919656 CT27 mCherry high B 48 HPI cell line:CT27; cell type:Trophoblast Stem Cells; genotype:WT; treatment:Infected 48 HPI mCherry high 27_HBH_48;Bierle_Project_013_raw_Gencode_v38_counts.csv;Bierle_Project_013_raw_EF999921.1_counts.csv
GSM7919706 CT27 EVT Mock A 48 HPI cell line:CT27; cell type:Extravillous trophoblasts; genotype:WT; treatment:Mock 48 HPI 9_27_EVT_48_M_A;Bierle_Project_014_raw_Gencode_v38_counts.csv;Bierle_Project_014_raw_EF999921.1_counts.csv
GSM7919657 CT27 mCherry low B 48 HPI cell line:CT27; cell type:Trophoblast Stem Cells; genotype:WT; treatment:Infected 48 HPI mCherry low 27_HBL_48;Bierle_Project_013_raw_Gencode_v38_counts.csv;Bierle_Project_013_raw_EF999921.1_counts.csv
GSM7919707 CT27 EVT Mock B 48 HPI cell line:CT27; cell type:Extravillous trophoblasts; genotype:WT; treatment:Mock 48 HPI 10_27_EVT_48_M_B;Bierle_Project_014_raw_Gencode_v38_counts.csv;Bierle_Project_014_raw_EF999921.1_counts.csv
GSM7919658 CT29 mCherry high A 48 HPI cell line:CT29; cell type:Trophoblast Stem Cells; genotype:WT; treatment:Infected 48 HPI mCherry high 29_HAH_48;Bierle_Project_013_raw_Gencode_v38_counts.csv;Bierle_Project_013_raw_EF999921.1_counts.csv
GSM7919708 CT27 EVT CMV A 48 HPI cell line:CT27; cell type:Extravillous trophoblasts; genotype:WT; treatment:Infected 48 HPI 11_27_EVT_48_C_A;Bierle_Project_014_raw_Gencode_v38_counts.csv;Bierle_Project_014_raw_EF999921.1_counts.csv
GSM7919659 CT29 mCherry low A 48 HPI cell line:CT29; cell type:Trophoblast Stem Cells; genotype:WT; treatment:Infected 48 HPI mCherry low 29_HAL_48;Bierle_Project_013_raw_Gencode_v38_counts.csv;Bierle_Project_013_raw_EF999921.1_counts.csv
GSM7919709 CT27 EVT CMV B 48 HPI cell line:CT27; cell type:Extravillous trophoblasts; genotype:WT; treatment:Infected 48 HPI 12_27_EVT_48_C_B;Bierle_Project_014_raw_Gencode_v38_counts.csv;Bierle_Project_014_raw_EF999921.1_counts.csv
GSM7919660 CT29 mCherry high B 48 HPI cell line:CT29; cell type:Trophoblast Stem Cells; genotype:WT; treatment:Infected 48 HPI mCherry high 29_HBH_48;Bierle_Project_013_raw_Gencode_v38_counts.csv;Bierle_Project_013_raw_EF999921.1_counts.csv
GSM7919710 CT29 EVT Mock A 48 HPI cell line:CT29; cell type:Extravillous trophoblasts; genotype:WT; treatment:Mock 48 HPI 13_29_EVT_48_M_A;Bierle_Project_014_raw_Gencode_v38_counts.csv;Bierle_Project_014_raw_EF999921.1_counts.csv
GSM7919711 CT29 EVT Mock B 48 HPI cell line:CT29; cell type:Extravillous trophoblasts; genotype:WT; treatment:Mock 48 HPI 14_29_EVT_48_M_B;Bierle_Project_014_raw_Gencode_v38_counts.csv;Bierle_Project_014_raw_EF999921.1_counts.csv
GSM7919661 CT29 mCherry low B 48 HPI cell line:CT29; cell type:Trophoblast Stem Cells; genotype:WT; treatment:Infected 48 HPI mCherry low 29_HBL_48;Bierle_Project_013_raw_Gencode_v38_counts.csv;Bierle_Project_013_raw_EF999921.1_counts.csv
GSM7919712 CT29 EVT CMV A 48 HPI cell line:CT29; cell type:Extravillous trophoblasts; genotype:WT; treatment:Infected 48 HPI 15_29_EVT_48_C_A;Bierle_Project_014_raw_Gencode_v38_counts.csv;Bierle_Project_014_raw_EF999921.1_counts.csv
GSM7919662 CT27 Mock A 72 HPI cell line:CT27; cell type:Trophoblast Stem Cells; genotype:WT; treatment:Mock 72 HPI 27_MA_72;Bierle_Project_013_raw_Gencode_v38_counts.csv;Bierle_Project_013_raw_EF999921.1_counts.csv
GSM7919713 CT29 EVT CMV B 48 HPI cell line:CT29; cell type:Extravillous trophoblasts; genotype:WT; treatment:Infected 48 HPI 16_29_EVT_48_C_B;Bierle_Project_014_raw_Gencode_v38_counts.csv;Bierle_Project_014_raw_EF999921.1_counts.csv
GSM7919663 CT27 Mock B 72 HPI cell line:CT27; cell type:Trophoblast Stem Cells; genotype:WT; treatment:Mock 72 HPI 27_MB_72;Bierle_Project_013_raw_Gencode_v38_counts.csv;Bierle_Project_013_raw_EF999921.1_counts.csv
GSM7919714 CT27 EVT Mock A 72 HPI cell line:CT27; cell type:Extravillous trophoblasts; genotype:WT; treatment:Mock 72 HPI 17_27_EVT_72_M_A;Bierle_Project_014_raw_Gencode_v38_counts.csv;Bierle_Project_014_raw_EF999921.1_counts.csv
GSM7919664 CT29 Mock A 72 HPI cell line:CT29; cell type:Trophoblast Stem Cells; genotype:WT; treatment:Mock 72 HPI 29_MA_72;Bierle_Project_013_raw_Gencode_v38_counts.csv;Bierle_Project_013_raw_EF999921.1_counts.csv
GSM7919715 CT27 EVT Mock B 72 HPI cell line:CT27; cell type:Extravillous trophoblasts; genotype:WT; treatment:Mock 72 HPI 18_27_EVT_72_M_B;Bierle_Project_014_raw_Gencode_v38_counts.csv;Bierle_Project_014_raw_EF999921.1_counts.csv
GSM7919665 CT29 Mock B 72 HPI cell line:CT29; cell type:Trophoblast Stem Cells; genotype:WT; treatment:Mock 72 HPI 29_MB_72;Bierle_Project_013_raw_Gencode_v38_counts.csv;Bierle_Project_013_raw_EF999921.1_counts.csv
GSM7919716 CT27 EVT CMV A 72 HPI cell line:CT27; cell type:Extravillous trophoblasts; genotype:WT; treatment:Infected 72 HPI 19_27_EVT_72_C_A;Bierle_Project_014_raw_Gencode_v38_counts.csv;Bierle_Project_014_raw_EF999921.1_counts.csv
GSM7919666 CT27 mCherry high A 72 HPI cell line:CT27; cell type:Trophoblast Stem Cells; genotype:WT; treatment:Infected 72 HPI mCherry high 27_HAH_72;Bierle_Project_013_raw_Gencode_v38_counts.csv;Bierle_Project_013_raw_EF999921.1_counts.csv
GSM7919717 CT27 EVT CMV B 72 HPI cell line:CT27; cell type:Extravillous trophoblasts; genotype:WT; treatment:Infected 72 HPI 20_27_EVT_72_C_B;Bierle_Project_014_raw_Gencode_v38_counts.csv;Bierle_Project_014_raw_EF999921.1_counts.csv
GSM7919667 CT27 mCherry low A 72 HPI cell line:CT27; cell type:Trophoblast Stem Cells; genotype:WT; treatment:Infected 72 HPI mCherry low 27_HAL_72;Bierle_Project_013_raw_Gencode_v38_counts.csv;Bierle_Project_013_raw_EF999921.1_counts.csv
GSM7919718 CT29 EVT Mock A 72 HPI cell line:CT29; cell type:Extravillous trophoblasts; genotype:WT; treatment:Mock 72 HPI 21_29_EVT_72_M_A;Bierle_Project_014_raw_Gencode_v38_counts.csv;Bierle_Project_014_raw_EF999921.1_counts.csv
GSM7919668 CT27 mCherry high B 72 HPI cell line:CT27; cell type:Trophoblast Stem Cells; genotype:WT; treatment:Infected 72 HPI mCherry high 27_HBH_72;Bierle_Project_013_raw_Gencode_v38_counts.csv;Bierle_Project_013_raw_EF999921.1_counts.csv
GSM7919719 CT29 EVT Mock B 72 HPI cell line:CT29; cell type:Extravillous trophoblasts; genotype:WT; treatment:Mock 72 HPI 22_29_EVT_72_M_B;Bierle_Project_014_raw_Gencode_v38_counts.csv;Bierle_Project_014_raw_EF999921.1_counts.csv
GSM7919669 CT27 mCherry low B 72 HPI cell line:CT27; cell type:Trophoblast Stem Cells; genotype:WT; treatment:Infected 72 HPI mCherry low 27_HBL_72;Bierle_Project_013_raw_Gencode_v38_counts.csv;Bierle_Project_013_raw_EF999921.1_counts.csv
GSM7919720 CT29 EVT CMV A 72 HPI cell line:CT29; cell type:Extravillous trophoblasts; genotype:WT; treatment:Infected 72 HPI 23_29_EVT_72_C_A;Bierle_Project_014_raw_Gencode_v38_counts.csv;Bierle_Project_014_raw_EF999921.1_counts.csv
GSM7919670 CT29 mCherry high A 72 HPI cell line:CT29; cell type:Trophoblast Stem Cells; genotype:WT; treatment:Infected 72 HPI mCherry high 29_HAH_72;Bierle_Project_013_raw_Gencode_v38_counts.csv;Bierle_Project_013_raw_EF999921.1_counts.csv
GSM7919721 CT29 EVT CMV B 72 HPI cell line:CT29; cell type:Extravillous trophoblasts; genotype:WT; treatment:Infected 72 HPI 24_29_EVT_72_C_B;Bierle_Project_014_raw_Gencode_v38_counts.csv;Bierle_Project_014_raw_EF999921.1_counts.csv
GSM7919671 CT29 mCherry low A 72 HPI cell line:CT29; cell type:Trophoblast Stem Cells; genotype:WT; treatment:Infected 72 HPI mCherry low 29_HAL_72;Bierle_Project_013_raw_Gencode_v38_counts.csv;Bierle_Project_013_raw_EF999921.1_counts.csv
GSM7919672 CT29 mCherry high B 72 HPI cell line:CT29; cell type:Trophoblast Stem Cells; genotype:WT; treatment:Infected 72 HPI mCherry high 29_HBH_72;Bierle_Project_013_raw_Gencode_v38_counts.csv;Bierle_Project_013_raw_EF999921.1_counts.csv
GSM7919673 CT29 mCherry low B 72 HPI cell line:CT29; cell type:Trophoblast Stem Cells; genotype:WT; treatment:Infected 72 HPI mCherry low 29_HBL_72;Bierle_Project_013_raw_Gencode_v38_counts.csv;Bierle_Project_013_raw_EF999921.1_counts.csv
GSM7919674 CT27 STB Mock A 24 HPI cell line:CT27; cell type:Syncytiotrophoblast; genotype:WT; treatment:Mock 24 HPI 1_27_STB_24_M_A;Bierle_Project_014_raw_Gencode_v38_counts.csv;Bierle_Project_014_raw_EF999921.1_counts.csv
GSM7919675 CT27 STB Mock B 24 HPI cell line:CT27; cell type:Syncytiotrophoblast; genotype:WT; treatment:Mock 24 HPI 2_27_STB_24_M_B;Bierle_Project_014_raw_Gencode_v38_counts.csv;Bierle_Project_014_raw_EF999921.1_counts.csv
GSM7919676 CT27 STB CMV A 24 HPI cell line:CT27; cell type:Syncytiotrophoblast; genotype:WT; treatment:Infected 24 HPI 3_27_STB_24_C_A;Bierle_Project_014_raw_Gencode_v38_counts.csv;Bierle_Project_014_raw_EF999921.1_counts.csv
GSM7919677 CT27 STB CMV B 24 HPI cell line:CT27; cell type:Syncytiotrophoblast; genotype:WT; treatment:Infected 24 HPI 4_27_STB_24_C_B;Bierle_Project_014_raw_Gencode_v38_counts.csv;Bierle_Project_014_raw_EF999921.1_counts.csv
GSM7919678 CT29 STB Mock A 24 HPI cell line:CT29; cell type:Syncytiotrophoblast; genotype:WT; treatment:Mock 24 HPI 5_29_STB_24_M_A;Bierle_Project_014_raw_Gencode_v38_counts.csv;Bierle_Project_014_raw_EF999921.1_counts.csv
GSM7919679 CT29 STB Mock B 24 HPI cell line:CT29; cell type:Syncytiotrophoblast; genotype:WT; treatment:Mock 24 HPI 6_29_STB_24_M_B;Bierle_Project_014_raw_Gencode_v38_counts.csv;Bierle_Project_014_raw_EF999921.1_counts.csv
GSM7919680 CT29 STB CMV A 24 HPI cell line:CT29; cell type:Syncytiotrophoblast; genotype:WT; treatment:Infected 24 HPI 7_29_STB_24_C_A;Bierle_Project_014_raw_Gencode_v38_counts.csv;Bierle_Project_014_raw_EF999921.1_counts.csv
GSM7919681 CT29 STB CMV B 24 HPI cell line:CT29; cell type:Syncytiotrophoblast; genotype:WT; treatment:Infected 24 HPI 8_29_STB_24_C_B;Bierle_Project_014_raw_Gencode_v38_counts.csv;Bierle_Project_014_raw_EF999921.1_counts.csv
GSM7919682 CT27 STB Mock A 48 HPI cell line:CT27; cell type:Syncytiotrophoblast; genotype:WT; treatment:Mock 48 HPI 9_27_STB_48_M_A;Bierle_Project_014_raw_Gencode_v38_counts.csv;Bierle_Project_014_raw_EF999921.1_counts.csv
GSM7919683 CT27 STB Mock B 48 HPI cell line:CT27; cell type:Syncytiotrophoblast; genotype:WT; treatment:Mock 48 HPI 10_27_STB_48_M_B;Bierle_Project_014_raw_Gencode_v38_counts.csv;Bierle_Project_014_raw_EF999921.1_counts.csv
GSM7919684 CT27 STB CMV A 48 HPI cell line:CT27; cell type:Syncytiotrophoblast; genotype:WT; treatment:Infected 48 HPI 11_27_STB_48_C_A;Bierle_Project_014_raw_Gencode_v38_counts.csv;Bierle_Project_014_raw_EF999921.1_counts.csv
GSM7919685 CT27 STB CMV B 48 HPI cell line:CT27; cell type:Syncytiotrophoblast; genotype:WT; treatment:Infected 48 HPI 12_27_STB_48_C_B;Bierle_Project_014_raw_Gencode_v38_counts.csv;Bierle_Project_014_raw_EF999921.1_counts.csv
GSM7919686 CT29 STB Mock A 48 HPI cell line:CT29; cell type:Syncytiotrophoblast; genotype:WT; treatment:Mock 48 HPI 13_29_STB_48_M_A;Bierle_Project_014_raw_Gencode_v38_counts.csv;Bierle_Project_014_raw_EF999921.1_counts.csv
GSM7919687 CT29 STB Mock B 48 HPI cell line:CT29; cell type:Syncytiotrophoblast; genotype:WT; treatment:Mock 48 HPI 14_29_STB_48_M_B;Bierle_Project_014_raw_Gencode_v38_counts.csv;Bierle_Project_014_raw_EF999921.1_counts.csv
GSM7919688 CT29 STB CMV A 48 HPI cell line:CT29; cell type:Syncytiotrophoblast; genotype:WT; treatment:Infected 48 HPI 15_29_STB_48_C_A;Bierle_Project_014_raw_Gencode_v38_counts.csv;Bierle_Project_014_raw_EF999921.1_counts.csv
GSM7919689 CT29 STB CMV B 48 HPI cell line:CT29; cell type:Syncytiotrophoblast; genotype:WT; treatment:Infected 48 HPI 16_29_STB_48_C_B;Bierle_Project_014_raw_Gencode_v38_counts.csv;Bierle_Project_014_raw_EF999921.1_counts.csv
GSM7919690 CT27 STB Mock A 72 HPI cell line:CT27; cell type:Syncytiotrophoblast; genotype:WT; treatment:Mock 72 HPI 17_27_STB_72_M_A;Bierle_Project_014_raw_Gencode_v38_counts.csv;Bierle_Project_014_raw_EF999921.1_counts.csv
Platform GPL24676  : Illumina NovaSeq 6000 (Homo sapiens)
Literature 38451085  
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xCell Plot
* p<0.05 ** p<0.01