Virus Dataset Detail

> Detail information for each sample

Dataset Information
Accession GSE168598
Status 2021/11/4
Title Transcriptomics of Kidney Transplant Recipients after Cytomegalovirus DNAemia
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary To study the gene expression dynamics in cytomegalovirus (CMV) DNAemic patients after kidney transplantation, we performed RNA sequencing (RNAseq) on 31 DNAemic patients at 4 timepoints (baseline, 1 week post-DNAemia, 1 month post-DNAemia, and a long-term timepoint 9-18 months post-DNAemia) matched with 31 non-DNAemic patients at 2 timepoints (baseline and long-term).
Samples
GSM ID Sample info Characteristics Description
GSM5150366 R5933 subject id:943; timepoint:Baseline; cmv dnaemia:PCR.pos -
GSM5150367 R6095 subject id:992; timepoint:Baseline; cmv dnaemia:PCR.pos -
GSM5150368 R6151 subject id:1042; timepoint:Baseline; cmv dnaemia:PCR.pos -
GSM5150369 R6184 subject id:1053; timepoint:Baseline; cmv dnaemia:PCR.pos -
GSM5150370 R6305 subject id:1087; timepoint:Baseline; cmv dnaemia:PCR.pos -
GSM5150371 R6602 subject id:1115; timepoint:Baseline; cmv dnaemia:PCR.pos -
GSM5150372 R6824 subject id:1151; timepoint:Baseline; cmv dnaemia:PCR.pos -
GSM5150373 R6856 subject id:1162; timepoint:Baseline; cmv dnaemia:PCR.pos -
GSM5150374 R7002 subject id:1176; timepoint:Baseline; cmv dnaemia:PCR.pos -
GSM5150375 R7559 subject id:1248; timepoint:Baseline; cmv dnaemia:PCR.pos -
GSM5150376 R7633 subject id:1242; timepoint:Baseline; cmv dnaemia:PCR.pos -
GSM5150377 R7702 subject id:1234; timepoint:Baseline; cmv dnaemia:PCR.pos -
GSM5150378 R8263 subject id:1305; timepoint:Baseline; cmv dnaemia:PCR.pos -
GSM5150379 R8516 subject id:1336; timepoint:Baseline; cmv dnaemia:PCR.pos -
GSM5150380 R8517 subject id:1328; timepoint:Baseline; cmv dnaemia:PCR.pos -
GSM5150381 R8680 subject id:1368; timepoint:Baseline; cmv dnaemia:PCR.pos -
GSM5150382 R8704 subject id:1353; timepoint:Baseline; cmv dnaemia:PCR.pos -
GSM5150383 R8765 subject id:1358; timepoint:Baseline; cmv dnaemia:PCR.pos -
GSM5150384 R8882 subject id:1357; timepoint:Baseline; cmv dnaemia:PCR.pos -
GSM5150385 R9148 subject id:1431; timepoint:Baseline; cmv dnaemia:PCR.pos -
GSM5150386 R9278 subject id:1416; timepoint:Baseline; cmv dnaemia:PCR.pos -
GSM5150387 R5572 subject id:908; timepoint:Baseline; cmv dnaemia:PCR.neg -
GSM5150395 R6554 subject id:1133; timepoint:Baseline; cmv dnaemia:PCR.neg -
GSM5150396 R6578 subject id:1104; timepoint:Baseline; cmv dnaemia:PCR.neg -
GSM5150397 R6607 subject id:1116; timepoint:Baseline; cmv dnaemia:PCR.neg -
GSM5150398 R6700 subject id:1126; timepoint:Baseline; cmv dnaemia:PCR.neg -
GSM5150399 R7302 subject id:1189; timepoint:Baseline; cmv dnaemia:PCR.neg -
GSM5150400 R7435 subject id:1206; timepoint:Baseline; cmv dnaemia:PCR.neg -
GSM5150401 R7607 subject id:1240; timepoint:Baseline; cmv dnaemia:PCR.neg -
GSM5150402 R7631 subject id:1210; timepoint:Baseline; cmv dnaemia:PCR.neg -
GSM5150403 R7651 subject id:1245; timepoint:Baseline; cmv dnaemia:PCR.neg -
GSM5150404 R7774 subject id:1235; timepoint:Baseline; cmv dnaemia:PCR.neg -
GSM5150405 R8213 subject id:1277; timepoint:Baseline; cmv dnaemia:PCR.neg -
GSM5150406 R8335 subject id:3; timepoint:Baseline; cmv dnaemia:PCR.neg -
GSM5150407 R8362 subject id:1313; timepoint:Baseline; cmv dnaemia:PCR.neg -
GSM5150408 R8365 subject id:1317; timepoint:Baseline; cmv dnaemia:PCR.neg -
GSM5150409 R8379 subject id:1276; timepoint:Baseline; cmv dnaemia:PCR.neg -
GSM5150410 R8450 subject id:1244; timepoint:Baseline; cmv dnaemia:PCR.neg -
GSM5150411 R8473 subject id:1300; timepoint:Baseline; cmv dnaemia:PCR.neg -
GSM5150412 R8757 subject id:1348; timepoint:Baseline; cmv dnaemia:PCR.neg -
GSM5150413 R8871 subject id:1367; timepoint:Baseline; cmv dnaemia:PCR.neg -
GSM5150414 R8923 subject id:1384; timepoint:Baseline; cmv dnaemia:PCR.neg -
GSM5150415 R9018 subject id:1404; timepoint:Baseline; cmv dnaemia:PCR.neg -
GSM5150416 R9146 subject id:1392; timepoint:Baseline; cmv dnaemia:PCR.neg -
GSM5150417 R9204 subject id:1425; timepoint:Baseline; cmv dnaemia:PCR.neg -
GSM5150418 R6207 subject id:943; timepoint:Longterm; cmv dnaemia:PCR.pos -
GSM5150419 R6893 subject id:1021; timepoint:Longterm; cmv dnaemia:PCR.pos -
GSM5150420 R7086 subject id:1115; timepoint:Longterm; cmv dnaemia:PCR.pos -
GSM5150421 R7140 subject id:1143; timepoint:Longterm; cmv dnaemia:PCR.pos -
GSM5150422 R7205 subject id:1151; timepoint:Longterm; cmv dnaemia:PCR.pos -
GSM5150423 R7277 subject id:1150; timepoint:Longterm; cmv dnaemia:PCR.pos -
GSM5150508 R7894 subject id:1273; timepoint:wk1; cmv dnaemia:PCR.pos -
GSM5150424 R7389 subject id:1176; timepoint:Longterm; cmv dnaemia:PCR.pos -
GSM5150425 R7797 subject id:1234; timepoint:Longterm; cmv dnaemia:PCR.pos -
GSM5150509 R8251 subject id:1320; timepoint:wk1; cmv dnaemia:PCR.pos -
GSM5150426 R7867 subject id:1059; timepoint:Longterm; cmv dnaemia:PCR.pos -
GSM5150510 R8519 subject id:1305; timepoint:wk1; cmv dnaemia:PCR.pos -
GSM5150427 R9047 subject id:1305; timepoint:Longterm; cmv dnaemia:PCR.pos -
GSM5150511 R8560 subject id:1336; timepoint:wk1; cmv dnaemia:PCR.pos -
GSM5150428 R9180 subject id:1336; timepoint:Longterm; cmv dnaemia:PCR.pos -
GSM5150512 R8786 subject id:1368; timepoint:wk1; cmv dnaemia:PCR.pos -
GSM5150429 R9345 subject id:1353; timepoint:Longterm; cmv dnaemia:PCR.pos -
GSM5150513 R8971 subject id:1328; timepoint:wk1; cmv dnaemia:PCR.pos -
GSM5150430 R9362 subject id:1357; timepoint:Longterm; cmv dnaemia:PCR.pos -
GSM5150514 R9091 subject id:1357; timepoint:wk1; cmv dnaemia:PCR.pos -
GSM5150431 R9378 subject id:1354; timepoint:Longterm; cmv dnaemia:PCR.pos -
GSM5150515 R9113 subject id:1353; timepoint:wk1; cmv dnaemia:PCR.pos -
GSM5150432 R9412 subject id:1416; timepoint:Longterm; cmv dnaemia:PCR.pos -
GSM5150516 R9121 subject id:1354; timepoint:wk1; cmv dnaemia:PCR.pos -
GSM5150517 R9241 subject id:1358; timepoint:wk1; cmv dnaemia:PCR.pos -
GSM5150433 R9428 subject id:1431; timepoint:Longterm; cmv dnaemia:PCR.pos -
GSM5150518 R9302 subject id:1431; timepoint:wk1; cmv dnaemia:PCR.pos -
GSM5150434 R9430 subject id:1368; timepoint:Longterm; cmv dnaemia:PCR.pos -
GSM5150519 R9332 subject id:1416; timepoint:wk1; cmv dnaemia:PCR.pos -
GSM5150435 R5925 subject id:914; timepoint:Longterm; cmv dnaemia:PCR.neg -
GSM5150436 R5950 subject id:908; timepoint:Longterm; cmv dnaemia:PCR.neg -
GSM5150437 R6233 subject id:965; timepoint:Longterm; cmv dnaemia:PCR.neg -
GSM5150438 R6511 subject id:974; timepoint:Longterm; cmv dnaemia:PCR.neg -
GSM5150439 R6601 subject id:1027; timepoint:Longterm; cmv dnaemia:PCR.neg -
GSM5150440 R6713 subject id:999; timepoint:Longterm; cmv dnaemia:PCR.neg -
GSM5150441 R6731 subject id:1028; timepoint:Longterm; cmv dnaemia:PCR.neg -
GSM5150442 R6855 subject id:1050; timepoint:Longterm; cmv dnaemia:PCR.neg -
GSM5150443 R7007 subject id:1133; timepoint:Longterm; cmv dnaemia:PCR.neg -
GSM5150444 R7135 subject id:1104; timepoint:Longterm; cmv dnaemia:PCR.neg -
GSM5150445 R7293 subject id:1126; timepoint:Longterm; cmv dnaemia:PCR.neg -
GSM5150446 R7830 subject id:1206; timepoint:Longterm; cmv dnaemia:PCR.neg -
GSM5150447 R7832 subject id:1189; timepoint:Longterm; cmv dnaemia:PCR.neg -
GSM5150448 R8002 subject id:1240; timepoint:Longterm; cmv dnaemia:PCR.neg -
GSM5150449 R8052 subject id:1210; timepoint:Longterm; cmv dnaemia:PCR.neg -
GSM5150450 R8247 subject id:1245; timepoint:Longterm; cmv dnaemia:PCR.neg -
GSM5150451 R8500 subject id:1235; timepoint:Longterm; cmv dnaemia:PCR.neg -
GSM5150452 R8515 subject id:1317; timepoint:Longterm; cmv dnaemia:PCR.neg -
GSM5150453 R8625 subject id:1276; timepoint:Longterm; cmv dnaemia:PCR.neg -
GSM5150454 R8781 subject id:1244; timepoint:Longterm; cmv dnaemia:PCR.neg -
GSM5150455 R8942 subject id:1313; timepoint:Longterm; cmv dnaemia:PCR.neg -
GSM5150456 R8955 subject id:1277; timepoint:Longterm; cmv dnaemia:PCR.neg -
GSM5150457 R8974 subject id:1300; timepoint:Longterm; cmv dnaemia:PCR.neg -
GSM5150458 R9088 subject id:3; timepoint:Longterm; cmv dnaemia:PCR.neg -
GSM5150459 R9340 subject id:1348; timepoint:Longterm; cmv dnaemia:PCR.neg -
GSM5150460 R9347 subject id:1384; timepoint:Longterm; cmv dnaemia:PCR.neg -
GSM5150461 R9351 subject id:1392; timepoint:Longterm; cmv dnaemia:PCR.neg -
GSM5150462 R9355 subject id:1404; timepoint:Longterm; cmv dnaemia:PCR.neg -
GSM5150463 R9372 subject id:1367; timepoint:Longterm; cmv dnaemia:PCR.neg -
GSM5150464 R9414 subject id:1425; timepoint:Longterm; cmv dnaemia:PCR.neg -
GSM5150465 R6078 subject id:1021; timepoint:mo1; cmv dnaemia:PCR.pos -
GSM5150466 R6089 subject id:992; timepoint:mo1; cmv dnaemia:PCR.pos -
GSM5150467 R6139 subject id:943; timepoint:mo1; cmv dnaemia:PCR.pos -
GSM5150468 R6221 subject id:1053; timepoint:mo1; cmv dnaemia:PCR.pos -
GSM5150469 R6443 subject id:1087; timepoint:mo1; cmv dnaemia:PCR.pos -
GSM5150470 R6651 subject id:1042; timepoint:mo1; cmv dnaemia:PCR.pos -
GSM5150471 R6924 subject id:1151; timepoint:mo1; cmv dnaemia:PCR.pos -
GSM5150472 R6989 subject id:1115; timepoint:mo1; cmv dnaemia:PCR.pos -
GSM5150473 R7082 subject id:1150; timepoint:mo1; cmv dnaemia:PCR.pos -
GSM5150474 R7204 subject id:1176; timepoint:mo1; cmv dnaemia:PCR.pos -
GSM5150475 R7325 subject id:1197; timepoint:mo1; cmv dnaemia:PCR.pos -
GSM5150476 R7433 subject id:1169; timepoint:mo1; cmv dnaemia:PCR.pos -
GSM5150477 R7454 subject id:1162; timepoint:mo1; cmv dnaemia:PCR.pos -
GSM5150478 R7652 subject id:1248; timepoint:mo1; cmv dnaemia:PCR.pos -
GSM5150479 R7754 subject id:1234; timepoint:mo1; cmv dnaemia:PCR.pos -
GSM5150480 R7775 subject id:1242; timepoint:mo1; cmv dnaemia:PCR.pos -
GSM5150481 R7970 subject id:1273; timepoint:mo1; cmv dnaemia:PCR.pos -
GSM5150482 R8407 subject id:1320; timepoint:mo1; cmv dnaemia:PCR.pos -
GSM5150483 R8579 subject id:1305; timepoint:mo1; cmv dnaemia:PCR.pos -
GSM5150484 R8679 subject id:1336; timepoint:mo1; cmv dnaemia:PCR.pos -
GSM5150485 R8876 subject id:1368; timepoint:mo1; cmv dnaemia:PCR.pos -
GSM5150486 R9057 subject id:1328; timepoint:mo1; cmv dnaemia:PCR.pos -
GSM5150487 R9169 subject id:1354; timepoint:mo1; cmv dnaemia:PCR.pos -
GSM5150488 R9288 subject id:1357; timepoint:mo1; cmv dnaemia:PCR.pos -
GSM5150489 R9306 subject id:1353; timepoint:mo1; cmv dnaemia:PCR.pos -
GSM5150490 R9309 subject id:1431; timepoint:mo1; cmv dnaemia:PCR.pos -
GSM5150491 R9318 subject id:1358; timepoint:mo1; cmv dnaemia:PCR.pos -
GSM5150492 R9359 subject id:1449; timepoint:mo1; cmv dnaemia:PCR.pos -
GSM5150493 R9373 subject id:1416; timepoint:mo1; cmv dnaemia:PCR.pos -
GSM5150494 R6042 subject id:992; timepoint:wk1; cmv dnaemia:PCR.pos -
GSM5150495 R6064 subject id:1021; timepoint:wk1; cmv dnaemia:PCR.pos -
GSM5150496 R6180 subject id:1042; timepoint:wk1; cmv dnaemia:PCR.pos -
GSM5150497 R6213 subject id:1053; timepoint:wk1; cmv dnaemia:PCR.pos -
GSM5150498 R6361 subject id:1087; timepoint:wk1; cmv dnaemia:PCR.pos -
GSM5150499 R6707 subject id:1143; timepoint:wk1; cmv dnaemia:PCR.pos -
GSM5150500 R6861 subject id:1151; timepoint:wk1; cmv dnaemia:PCR.pos -
GSM5150501 R6902 subject id:1162; timepoint:wk1; cmv dnaemia:PCR.pos -
GSM5150502 R6931 subject id:1150; timepoint:wk1; cmv dnaemia:PCR.pos -
GSM5150503 R7213 subject id:1169; timepoint:wk1; cmv dnaemia:PCR.pos -
GSM5150504 R7267 subject id:1059; timepoint:wk1; cmv dnaemia:PCR.pos -
GSM5150505 R7296 subject id:1197; timepoint:wk1; cmv dnaemia:PCR.pos -
GSM5150506 R7617 subject id:1248; timepoint:wk1; cmv dnaemia:PCR.pos -
GSM5150507 R7691 subject id:1242; timepoint:wk1; cmv dnaemia:PCR.pos -
GSM5150388 R5662 subject id:914; timepoint:Baseline; cmv dnaemia:PCR.neg -
GSM5150389 R5992 subject id:965; timepoint:Baseline; cmv dnaemia:PCR.neg -
GSM5150390 R6013 subject id:974; timepoint:Baseline; cmv dnaemia:PCR.neg -
GSM5150391 R6040 subject id:1027; timepoint:Baseline; cmv dnaemia:PCR.neg -
GSM5150392 R6126 subject id:1028; timepoint:Baseline; cmv dnaemia:PCR.neg -
GSM5150393 R6191 subject id:1050; timepoint:Baseline; cmv dnaemia:PCR.neg -
GSM5150394 R6271 subject id:999; timepoint:Baseline; cmv dnaemia:PCR.neg -
Platform GPL21290  : Illumina HiSeq 3000 (Homo sapiens)
Literature 34867983  34609965  
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xCell Plot
* p<0.05 ** p<0.01