EBV Target gene Detail Information

> NFKB1 Gene Search Result


Gene Information
Gene Name NFKB1
Gene ID 4790
Gene Full Name nuclear factor kappa B subunit 1
Gene Alias CVID12|EBP-1|KBF1|NF-kB|NF-kB1|NF-kappa-B1|NF-kappaB|NF-kappabeta|NFKB-p105|NFKB-p50|NFkappaB
Transcripts ENSG00000109320
Virus EBV
Gene Type protein-coding
HPA Location Info Nucleoplasm;Cytosol;
Membrane Info Cancer-related genes, Disease related genes, FDA approved drug targets, Human disease related genes, Plasma proteins, Predicted intracellular proteins, RAS pathway related proteins, Transcription factors
Uniport_ID P19838
HGNC ID HGNC:7794
OMIM ID 164011
Summary This gene encodes a 105 kD protein which can undergo cotranslational processing by the 26S proteasome to produce a 50 kD protein. The 105 kD protein is a Rel protein-specific transcription inhibitor and the 50 kD protein is a DNA binding subunit of the NF-kappa-B (NFKB) protein complex. NFKB is a transcription regulator that is activated by various intra- and extra-cellular stimuli such as cytokines, oxidant-free radicals, ultraviolet irradiation, and bacterial or viral products. Activated NFKB translocates into the nucleus and stimulates the expression of genes involved in a wide variety of biological functions. Inappropriate activation of NFKB has been associated with a number of inflammatory diseases while persistent inhibition of NFKB leads to inappropriate immune cell development or delayed cell growth. NFKB is a critical regulator of the immediate-early response to viral infection. Alternative splicing results in multiple transcript variants encoding different isoforms, at least one of which is proteolytically processed. [provided by RefSeq, Aug 2020]
Target gene [NFKB1] related to virus gene/protein/region

Mutation Table: if previous studies reported that target gene was related to virus gene/region/protein, the information in this literature was listed in this section


ID PMID Mutation Gene/Protein/Region Encoding Gene/Protein Disease Description Detail
1 19119421 K122A
BILF1
BILF1
Cell line
T
View
2 9123876 Z214R
BZLF1
BZLF1
Cell line
T
View
3 9123876 Z214S
BZLF1
BZLF1
Cell line
T
View
4 9123876 Z218R
BZLF1
BZLF1
Cell line
T
View
5 9123876 Z218S
BZLF1
BZLF1
Cell line
T
View
6 9123876 Z225E
BZLF1
BZLF1
Cell line
T
View
7 9123876 Y200E
BZLF1
BZLF1
Cell line
T
View
8 9733827 Q206A
LMP-1
LMP-1
Cell line
T
View
9 9733827 P204A
LMP-1
LMP-1
Cell line
T
View
10 22384168 D150A
LMP-1
LMP-1
Lymphoproliferative Disorders
L
T
View
11 22384168 M129I
LMP-1
LMP-1
Lymphoproliferative Disorders
L
T
View
12 22384168 D46N
LMP-1
LMP-1
Lymphoproliferative Disorders
L
T
View
13 22384168 E328A
LMP-1
LMP-1
Lymphoproliferative Disorders
L
T
View
14 22384168 F106Y
LMP-1
LMP-1
Lymphoproliferative Disorders
L
T
View
15 22384168 F144I
LMP-1
LMP-1
Lymphoproliferative Disorders
L
T
View
16 22384168 L151I
LMP-1
LMP-1
Lymphoproliferative Disorders
L
T
View
17 22384168 I124V
LMP-1
LMP-1
Lymphoproliferative Disorders
L
T
View
18 22384168 I137L
LMP-1
LMP-1
Lymphoproliferative Disorders
L
T
View
19 22384168 I144F
LMP-1
LMP-1
Lymphoproliferative Disorders
L
T
View
20 22384168 I152L
LMP-1
LMP-1
Lymphoproliferative Disorders
L
T
View
21 22384168 I68L
LMP-1
LMP-1
Lymphoproliferative Disorders
L
T
View
22 22384168 I85L
LMP-1
LMP-1
Lymphoproliferative Disorders
L
T
View
23 22384168 L150I
LMP-1
LMP-1
Lymphoproliferative Disorders
L
T
View
24 22384168 L178M
LMP-1
LMP-1
Lymphoproliferative Disorders
L
T
View
25 22384168 L29V
LMP-1
LMP-1
Lymphoproliferative Disorders
L
T
View
26 22384168 Q189P
LMP-1
LMP-1
Lymphoproliferative Disorders
L
T
View
27 22384168 S192T
LMP-1
LMP-1
Lymphoproliferative Disorders
L
T
View
28 22384168 V43L
LMP-1
LMP-1
Lymphoproliferative Disorders
L
T
View
29 22384168 G212S
LMP-1
LMP-1
Lymphoproliferative Disorders
L
T
View
30 21560118 D150A
LMP-1
LMP-1

T
View
31 14687985 69bp del
LMP-1
LMP-1
B-Cell Lymphocytosis
T
View

Target gene [NFKB1] related to Omics data
Data ID Experiment type Sample number Platform
GSE42867 Expression array 12 [HG-U133_Plus_2] Affymetrix Human Genome U133 Plus 2.0 Array
C
  GSE246060
Chip-seq 26 Illumina NovaSeq 6000 (Homo sapiens)
E
  GSE45919
Expression array 24 Illumina HumanHT-12 V4.0 expression beadchip
GSE198332 Methylation profiling (Array) 7 Infinium MethylationEPIC
GSE223328 Expression array 16 Agilent-072363 SurePrint G3 Human GE v3 8x60K Microarray 039494 [Probe Name Version]
GSE208281 RNA-seq 50 Illumina NextSeq 500 (Homo sapiens)
GSE100458 Expression array 14 [HG-U133_Plus_2] Affymetrix Human Genome U133 Plus 2.0 Array [CDF: Brainarray HGU133Plus2_Hs_ENTREZG_v21]
C
  GSE198334
Chip-seq 4 Illumina NextSeq 500 (Homo sapiens)
GSE165194 RNA-seq 3 Illumina NextSeq 500 (Homo sapiens)
C
  GSE246059
ATAC-seq 8 Illumina NextSeq 500 (Homo sapiens);Illumina NovaSeq 6000 (Homo sapiens)
GSE177046 RNA-seq 6 Illumina HiSeq 2000 (Homo sapiens)
GSE135644 Expression array 10 Sentrix Human-6 v2 Expression BeadChip
C
  GSE225248
Chip-seq 12 Illumina NextSeq 500 (Homo sapiens)
GSE102203 Expression array 10 [HuGene-2_0-st] Affymetrix Human Gene 2.0 ST Array [probe set (exon) version]
GSE85599 Expression array 17 [HTA-2_0] Affymetrix Human Transcriptome Array 2.0 [transcript (gene) version]
GSE12452 Expression array 41 [HG-U133_Plus_2] Affymetrix Human Genome U133 Plus 2.0 Array
GSE58240 Expression array 32 Illumina HumanHT-12 V4.0 expression beadchip
GSE181906 RNA-seq 24 Illumina NovaSeq 6000 (Homo sapiens)


When the query gene is differentially changed in the dataset, a volcano/bar plot will be displayed.


> Dataset: GSE45919 - NFKB1 expression across samples

Volcano Plot


Bar Plot