HIV Target gene Detail Information

> PRAG1 Gene Search Result


Gene Information
Gene Name PRAG1
Gene ID 157285
Gene Full Name PEAK1 related, kinase-activating pseudokinase 1
Gene Alias NACK|PEAK2|PRAGMIN|SGK223
Transcripts ENSG00000275342
Virus HIV
Gene Type protein-coding
HPA Location Info Nucleoli;Focal adhesion sites;
Membrane Info Enzymes, Predicted intracellular proteins
Uniport_ID Q86YV5
HGNC ID HGNC:25438
OMIM ID 617344
Summary This gene encodes an enzyme that belongs to the tyrosine protein kinase family. A similar protein in rat binds to Rho family GTPase 2 (Rnd2) and regulates neurite outgrowth via activation of Ras homolog gene family, member A (RhoA). [provided by RefSeq, Mar 2014]
Target gene [PRAG1] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
4000650 chr8 176 53 108 337 View
4000884 chr8 105 43 108 256 View

Target gene [PRAG1] related to Omics data
Data ID Experiment type Sample number Platform
C
  GSE221688 		Chip-seq;scATAC-Seq;scRNA-Seq 12 Illumina NovaSeq 6000 (Homo sapiens)
GSE144332 RNA-seq 75 NextSeq 550 (Homo sapiens)
C
  GSE165705 		Chip-seq 30 Illumina NovaSeq 6000 (Homo sapiens)
GSE164264 RNA-seq 6 BGISEQ-500 (Homo sapiens)
C
  GSE30738 		Chip-seq 2 Illumina Genome Analyzer II (Homo sapiens)
GSE162914 RNA-seq 211 Illumina HiSeq 2500 (Homo sapiens)
C
  GSE144329 		ATAC-seq 96 NextSeq 550 (Homo sapiens)
GSE205204 RNA-seq 14 Illumina NovaSeq 6000 (Homo sapiens)
GSE125686 RNA-seq 62 Illumina HiSeq 2000 (Homo sapiens);Illumina HiSeq 2500 (Homo sapiens);Illumina NextSeq 500 (Homo sapiens)
C
  GSE220859 		Chip-seq 11 Illumina NovaSeq 6000 (Homo sapiens)
GSE165708 RNA-seq 100 Illumina HiSeq 4000 (Homo sapiens)
C
  GSE211651 		Chip-seq;RNA-seq;PRO-seq 39 Illumina NextSeq 500 (Homo sapiens);Illumina NovaSeq 6000 (Homo sapiens)
GSE198809 scRNA-seq 46 Illumina NovaSeq 6000 (Homo sapiens)
GSE68028 MeDIP-chip 1 NimbleGen Human DNA Methylation 2.1M Deluxe Promoter Array [100929_HG19_Deluxe_Prom_Meth_HX1]
C
  GSE100376 		ATAC-seq 24 Illumina NextSeq 500 (Homo sapiens)
GSE165132 RNA-seq 56 NextSeq 550 (Homo sapiens)
C
  GSE100266 		ATAC-seq;Chip-seq;RNA-seq 32 Illumina HiSeq 2500 (Homo sapiens)
C
  GSE165703 		ATAC-seq 82 Illumina HiSeq 4000 (Homo sapiens)
GSE246082 RNA-seq 6 Illumina HiSeq 4000 (Homo sapiens)


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE221688 - PRAG1 peak across samples

Peak Plot

> Dataset: GSE165705 - PRAG1 peak across samples

Peak Plot

> Dataset: GSE30738 - PRAG1 peak across samples

Peak Plot

> Dataset: GSE144329 - PRAG1 peak across samples

Peak Plot

> Dataset: GSE220859 - PRAG1 peak across samples

Peak Plot

> Dataset: GSE211651 - PRAG1 peak across samples

Peak Plot

> Dataset: GSE100376 - PRAG1 peak across samples

Peak Plot

> Dataset: GSE100266 - PRAG1 peak across samples

Peak Plot

> Dataset: GSE165703 - PRAG1 peak across samples

Peak Plot