HIV Target gene Detail Information

> CARMIL1 Gene Search Result


Gene Information
Gene Name CARMIL1
Gene ID 55604
Gene Full Name capping protein regulator and myosin 1 linker 1
Gene Alias CARMIL|CARMIL1a|LRRC16|LRRC16A|dJ501N12.1|dJ501N12.5
Transcripts ENSG00000079691
Virus HIV
Gene Type protein-coding
HPA Location Info Plasma membrane, Cytosol;Nuclear speckles;
Membrane Info Predicted intracellular proteins
Uniport_ID Q5VZK9
HGNC ID HGNC:21581
OMIM ID 609593
Summary Involved in several processes, including actin filament network formation; plasma membrane bounded cell projection organization; and positive regulation of cellular component organization. Located in several cellular components, including lamellipodium; macropinosome; and nuclear speck. [provided by Alliance of Genome Resources, Apr 2025]
Target gene [CARMIL1] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
4004075 chr6 3 9 38 50 View
4004076 chr6 3 9 38 50 View
4016386 chr6 0 0 0 0 View

Target gene [CARMIL1] related to Omics data
Data ID Experiment type Sample number Platform
C
  GSE221688 		Chip-seq;scATAC-Seq;scRNA-Seq 12 Illumina NovaSeq 6000 (Homo sapiens)
GSE144332 RNA-seq 75 NextSeq 550 (Homo sapiens)
C
  GSE165705 		Chip-seq 30 Illumina NovaSeq 6000 (Homo sapiens)
GSE164264 RNA-seq 6 BGISEQ-500 (Homo sapiens)
C
  GSE30738 		Chip-seq 2 Illumina Genome Analyzer II (Homo sapiens)
GSE128121 RNA-seq 16 Illumina HiSeq 4000 (Homo sapiens)
GSE162914 RNA-seq 211 Illumina HiSeq 2500 (Homo sapiens)
C
  GSE144329 		ATAC-seq 96 NextSeq 550 (Homo sapiens)
GSE205204 RNA-seq 14 Illumina NovaSeq 6000 (Homo sapiens)
GSE125686 RNA-seq 62 Illumina HiSeq 2000 (Homo sapiens);Illumina HiSeq 2500 (Homo sapiens);Illumina NextSeq 500 (Homo sapiens)
C
  GSE220859 		Chip-seq 11 Illumina NovaSeq 6000 (Homo sapiens)
GSE165708 RNA-seq 100 Illumina HiSeq 4000 (Homo sapiens)
C
  GSE211651 		Chip-seq;RNA-seq;PRO-seq 39 Illumina NextSeq 500 (Homo sapiens);Illumina NovaSeq 6000 (Homo sapiens)
GSE68028 MeDIP-chip 1 NimbleGen Human DNA Methylation 2.1M Deluxe Promoter Array [100929_HG19_Deluxe_Prom_Meth_HX1]
C
  GSE100376 		ATAC-seq 24 Illumina NextSeq 500 (Homo sapiens)
GSE167211 RNA-seq 1 Illumina HiSeq 2000 (Homo sapiens)
GSE165132 RNA-seq 56 NextSeq 550 (Homo sapiens)
C
  GSE100266 		ATAC-seq;Chip-seq;RNA-seq 32 Illumina HiSeq 2500 (Homo sapiens)
C
  GSE165703 		ATAC-seq 82 Illumina HiSeq 4000 (Homo sapiens)
GSE246082 RNA-seq 6 Illumina HiSeq 4000 (Homo sapiens)


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE221688 - CARMIL1 peak across samples

Peak Plot

> Dataset: GSE165705 - CARMIL1 peak across samples

Peak Plot

> Dataset: GSE30738 - CARMIL1 peak across samples

Peak Plot

> Dataset: GSE144329 - CARMIL1 peak across samples

Peak Plot

> Dataset: GSE220859 - CARMIL1 peak across samples

Peak Plot

> Dataset: GSE211651 - CARMIL1 peak across samples

Peak Plot

> Dataset: GSE100376 - CARMIL1 peak across samples

Peak Plot

> Dataset: GSE100266 - CARMIL1 peak across samples

Peak Plot

> Dataset: GSE165703 - CARMIL1 peak across samples

Peak Plot