HIV Target gene Detail Information

> DCAF1 Gene Search Result


Gene Information
Gene Name DCAF1
Gene ID 9730
Gene Full Name DDB1 and CUL4 associated factor 1
Gene Alias RIP|VPRBP
Transcripts ENSG00000145041
Virus HIV
Gene Type protein-coding
HPA Location Info Nucleoplasm;Nucleoli fibrillar center;
Membrane Info Enzymes, Plasma proteins, Predicted intracellular proteins
Uniport_ID Q9Y4B6
HGNC ID HGNC:30911
OMIM ID 617259
Summary Enables histone H2AT120 kinase activity; nuclear estrogen receptor binding activity; and ubiquitin-like ligase-substrate adaptor activity. Involved in several processes, including cell competition in a multicellular organism; proteasome-mediated ubiquitin-dependent protein catabolic process; and regulation of primary metabolic process. Located in COP9 signalosome; fibrillar center; and nucleoplasm. Part of Cul4-RING E3 ubiquitin ligase complex. Is active in centrosome. [provided by Alliance of Genome Resources, Apr 2025]
Target gene [DCAF1] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
4001211 chr3 102 92 0 194 View
4003525 chr3 34 9 17 60 View
4005728 chr3 29 1 0 30 View
4010635 chr3 6 2 0 8 View
4011918 chr3 5 1 0 6 View
4014460 chr3 2 0 0 2 View
4015905 chr3 0 0 0 0 View
4016642 chr3 0 0 0 0 View

Target gene [DCAF1] related to Omics data
Data ID Experiment type Sample number Platform
C
  GSE221688 		Chip-seq;scATAC-Seq;scRNA-Seq 12 Illumina NovaSeq 6000 (Homo sapiens)
GSE144332 RNA-seq 75 NextSeq 550 (Homo sapiens)
C
  GSE165705 		Chip-seq 30 Illumina NovaSeq 6000 (Homo sapiens)
GSE164264 RNA-seq 6 BGISEQ-500 (Homo sapiens)
C
  GSE30738 		Chip-seq 2 Illumina Genome Analyzer II (Homo sapiens)
GSE128121 RNA-seq 16 Illumina HiSeq 4000 (Homo sapiens)
GSE162914 RNA-seq 211 Illumina HiSeq 2500 (Homo sapiens)
C
  GSE144329 		ATAC-seq 96 NextSeq 550 (Homo sapiens)
GSE205204 RNA-seq 14 Illumina NovaSeq 6000 (Homo sapiens)
GSE125686 RNA-seq 62 Illumina HiSeq 2000 (Homo sapiens);Illumina HiSeq 2500 (Homo sapiens);Illumina NextSeq 500 (Homo sapiens)
C
  GSE220859 		Chip-seq 11 Illumina NovaSeq 6000 (Homo sapiens)
GSE165708 RNA-seq 100 Illumina HiSeq 4000 (Homo sapiens)
C
  GSE211651 		Chip-seq;RNA-seq;PRO-seq 39 Illumina NextSeq 500 (Homo sapiens);Illumina NovaSeq 6000 (Homo sapiens)
GSE68028 MeDIP-chip 1 NimbleGen Human DNA Methylation 2.1M Deluxe Promoter Array [100929_HG19_Deluxe_Prom_Meth_HX1]
C
  GSE100376 		ATAC-seq 24 Illumina NextSeq 500 (Homo sapiens)
GSE167211 RNA-seq 1 Illumina HiSeq 2000 (Homo sapiens)
GSE165132 RNA-seq 56 NextSeq 550 (Homo sapiens)
C
  GSE100266 		ATAC-seq;Chip-seq;RNA-seq 32 Illumina HiSeq 2500 (Homo sapiens)
C
  GSE165703 		ATAC-seq 82 Illumina HiSeq 4000 (Homo sapiens)
GSE246082 RNA-seq 6 Illumina HiSeq 4000 (Homo sapiens)


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE221688 - DCAF1 peak across samples

Peak Plot

> Dataset: GSE165705 - DCAF1 peak across samples

Peak Plot

> Dataset: GSE30738 - DCAF1 peak across samples

Peak Plot

> Dataset: GSE144329 - DCAF1 peak across samples

Peak Plot

> Dataset: GSE220859 - DCAF1 peak across samples

Peak Plot

> Dataset: GSE211651 - DCAF1 peak across samples

Peak Plot

> Dataset: GSE100376 - DCAF1 peak across samples

Peak Plot

> Dataset: GSE100266 - DCAF1 peak across samples

Peak Plot

> Dataset: GSE165703 - DCAF1 peak across samples

Peak Plot