Virus Dataset Detail

> Detail information for each sample

Dataset Information
Accession GSE121385
Status 2018/10/18
Title RNA-Sequencing data of Varicella Zoster Virus (VZV)-infected human dermal fibroblasts (HDF)
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary RNA profiles of HDF infected with various VZV strains were generated by High-throughput sequencing using Illumina Hi-seq 2500
Samples
GSM ID Sample info Characteristics Description
GSM3433678 Mock cell type:Skin Fibroblast; passages:11; viral strain:n/a HDF
GSM3433680 HDF infected VZV YC01 -high cell type:Skin Fibroblast; passages:11; viral strain:YC01-high HDF;YC01-high VZV strain is derived from YC01-low strain and passaged for more than >100 times. YC01-high contains vaccine type mutations and is similar to VZV live attenuated vaccine strain.
GSM3433679 HDF infected VZV YC01-low cell type:Skin Fibroblast; passages:11; viral strain:YC01-low HDF;YC01-low is a clinical VZV strain isolated from Shingles patient and cultured at low passage.
GSM3433681 HDF infected VZV Suduvax CA cell type:Skin Fibroblast; passages:11; viral strain:Sudavax CA HDF
GSM3433682 HDF infected VZV Suduvax CF cell type:Skin Fibroblast; passages:11; viral strain:Sudavax CF HDF
GSM3433683 HDF infected VZV VarilRix cell type:Skin Fibroblast; passages:11; viral strain:VarilRix HDF
Platform GPL16791  : Illumina HiSeq 2500 (Homo sapiens)
Literature 31658769  
Download Download xCell Data  Download Expression Analysis Data  
xCell Plot
* p<0.05 ** p<0.01