Accession	GSE164841
Status	2021/3/5
Title	Chromatin accessibilty analysis of HCMV infected and mock-infected Kasumi-3 cells at 24 hours post infection
Organism	Homo sapiens;Human betaherpesvirus 5
Experiment type	Genome binding/occupancy profiling by high throughput sequencing
Summary	Purpose: to compare host gene expression in HCMV infected and mock infected Kasumi-3 cells at 24 hours post infection and analyze viral chromatin accessibility
Samples	GSM ID Sample info Characteristics Description GSM5020849 24hr_K3_Uninfected_Rep1 treatment: mock-infected, 24 hr;cell line: Kasumi-3;barcode: Ad2.1: TAAGGCGA ATACseq GSM5020850 24hr_K3_Uninfected_Rep2 treatment: mock-infected, 24 hr;cell line: Kasumi-3;barcode: Ad2.10: CGAGGCTG ATACseq GSM5020851 24hr_K3_Uninfected_Rep3 treatment: mock-infected, 24 hr;cell line: Kasumi-3;barcode: Ad.6: TAGGCATG ATACseq GSM5020852 24hr_K3_Infected_Rep1 treatment: HCMV infected, 24 hr;cell line: Kasumi-3;barcode: Ad2.2: CGTACTAG ATACseq GSM5020853 24hr_K3_Infected_Rep2 treatment: HCMV infected, 24 hr;cell line: Kasumi-3;barcode: Ad2.11: AAGAGGCA ATACseq GSM5020854 24hr_K3_Infected_Rep3 treatment: HCMV infected, 24 hr;cell line: Kasumi-3;barcode: Ad2.7:CTCTCTAC ATACseq
Platform	GPL18573  GPL24958  : Illumina NextSeq 500 (Homo sapiens);Illumina NextSeq 500 (Homo sapiens; Human betaherpesvirus 5)
Literature	33731453