HIV Target gene Detail Information

> ATP6V1G3 Gene Search Result


Gene Information
Gene Name ATP6V1G3
Gene ID 127124
Gene Full Name ATPase H+ transporting V1 subunit G3
Gene Alias ATP6G3|Vma10
Transcripts ENSG00000151418
Virus HIV
Gene Type protein-coding
HPA Location Info
Membrane Info Metabolic proteins, Predicted intracellular proteins, Transporters
Uniport_ID Q96LB4
HGNC ID HGNC:18265
OMIM ID 618071
Summary This gene encodes a component of vacuolar ATPase (V-ATPase), a multisubunit enzyme that mediates acidification of eukaryotic intracellular organelles. V-ATPase dependent organelle acidification is necessary for such intracellular processes as protein sorting, zymogen activation, receptor-mediated endocytosis, and synaptic vesicle proton gradient generation. V-ATPase is composed of a cytosolic V1 domain and a transmembrane V0 domain. The V1 domain consists of three A and three B subunits, two G subunits plus the C, D, E, F, and H subunits. The V1 domain contains the ATP catalytic site. The V0 domain consists of five different subunits: a, c, c', c'' and d. Additional isoforms of many of the V1 and V0 subunit proteins are encoded by multiple genes or alternatively spliced transcript variants. This gene encodes one of three G subunit proteins. Transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, Jul 2008]
Target gene [ATP6V1G3] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
4015771 chr1 0 1 0 1 View
4015772 chr1 0 1 0 1 View
4015773 chr1 0 1 0 1 View
4015774 chr1 0 1 0 1 View
4015775 chr1 0 1 0 1 View
4016732 chr1 0 0 0 0 View
4016733 chr1 0 0 0 0 View
4016734 chr1 0 0 0 0 View
4016735 chr1 0 0 0 0 View
4016736 chr1 0 0 0 0 View
4016737 chr1 0 0 0 0 View
4016738 chr1 0 0 0 0 View
4016739 chr1 0 0 0 0 View
4016740 chr1 0 0 0 0 View
4016741 chr1 0 0 0 0 View
4016742 chr1 0 0 0 0 View
4016743 chr1 0 0 0 0 View

Target gene [ATP6V1G3] related to Omics data
Data ID Experiment type Sample number Platform
C
  GSE221688 		Chip-seq;scATAC-Seq;scRNA-Seq 12 Illumina NovaSeq 6000 (Homo sapiens)
GSE99737 RNA-seq 9 Illumina HiSeq 2500 (Homo sapiens)
GSE144332 RNA-seq 75 NextSeq 550 (Homo sapiens)
C
  GSE165705 		Chip-seq 30 Illumina NovaSeq 6000 (Homo sapiens)
GSE164264 RNA-seq 6 BGISEQ-500 (Homo sapiens)
C
  GSE30738 		Chip-seq 2 Illumina Genome Analyzer II (Homo sapiens)
GSE262621 RNA-seq 70 Illumina NovaSeq 6000 (Homo sapiens)
GSE128121 RNA-seq 16 Illumina HiSeq 4000 (Homo sapiens)
GSE162914 RNA-seq 211 Illumina HiSeq 2500 (Homo sapiens)
GSE279982 Methylation profiling (Array) 576 Infinium MethylationEPIC
C
  GSE144329 		ATAC-seq 96 NextSeq 550 (Homo sapiens)
GSE205204 RNA-seq 14 Illumina NovaSeq 6000 (Homo sapiens)
GSE125686 RNA-seq 62 Illumina HiSeq 2000 (Homo sapiens);Illumina HiSeq 2500 (Homo sapiens);Illumina NextSeq 500 (Homo sapiens)
C
  GSE220859 		Chip-seq 11 Illumina NovaSeq 6000 (Homo sapiens)
GSE165708 RNA-seq 100 Illumina HiSeq 4000 (Homo sapiens)
GSE211651 Chip-seq;RNA-seq;PRO-seq 39 Illumina NextSeq 500 (Homo sapiens);Illumina NovaSeq 6000 (Homo sapiens)
GSE68028 MeDIP-chip 1 NimbleGen Human DNA Methylation 2.1M Deluxe Promoter Array [100929_HG19_Deluxe_Prom_Meth_HX1]
C
  GSE100376 		ATAC-seq 24 Illumina NextSeq 500 (Homo sapiens)
GSE167211 RNA-seq 1 Illumina HiSeq 2000 (Homo sapiens)
C
  GSE100266 		ATAC-seq;Chip-seq;RNA-seq 32 Illumina HiSeq 2500 (Homo sapiens)
C
  GSE165703 		ATAC-seq 82 Illumina HiSeq 4000 (Homo sapiens)
GSE246082 RNA-seq 6 Illumina HiSeq 4000 (Homo sapiens)


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE221688 - ATP6V1G3 peak across samples

Peak Plot

> Dataset: GSE165705 - ATP6V1G3 peak across samples

Peak Plot

> Dataset: GSE30738 - ATP6V1G3 peak across samples

Peak Plot

> Dataset: GSE144329 - ATP6V1G3 peak across samples

Peak Plot

> Dataset: GSE220859 - ATP6V1G3 peak across samples

Peak Plot

> Dataset: GSE100376 - ATP6V1G3 peak across samples

Peak Plot

> Dataset: GSE100266 - ATP6V1G3 peak across samples

Peak Plot

> Dataset: GSE165703 - ATP6V1G3 peak across samples

Peak Plot