HIV Target gene Detail Information

> ERCC6L2 Gene Search Result


Gene Information
Gene Name ERCC6L2
Gene ID 375748
Gene Full Name ERCC excision repair 6 like 2
Gene Alias BMFS2|C9orf102|HEBO|RAD26L|SR278
Transcripts ENSG00000182150
Virus HIV
Gene Type protein-coding
HPA Location Info Nucleoplasm, Cytosol;
Membrane Info Disease related genes, Human disease related genes, Predicted intracellular proteins, Predicted membrane proteins
Uniport_ID Q5T890
HGNC ID HGNC:26922
OMIM ID 615667
Summary This gene encodes a member of the Snf2 family of helicase-like proteins. The encoded protein may play a role in DNA repair and mitochondrial function. Mutations in this gene have been associated with bone marrow failure syndrome 2. Alternatively spliced transcript variants that encode different protein isoforms have been described. [provided by RefSeq, Apr 2014]
Target gene [ERCC6L2] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
4007157 chr9 18 3 0 21 View
4007364 chr9 17 3 0 20 View
4008839 chr9 9 5 0 14 View
4012370 chr9 5 0 0 5 View
4014080 chr9 2 0 0 2 View
4014081 chr9 2 0 0 2 View
4016805 chr9 36 2 1 39 View

Target gene [ERCC6L2] related to Omics data
Data ID Experiment type Sample number Platform
C
  GSE221688 		Chip-seq;scATAC-Seq;scRNA-Seq 12 Illumina NovaSeq 6000 (Homo sapiens)
GSE144332 RNA-seq 75 NextSeq 550 (Homo sapiens)
C
  GSE165705 		Chip-seq 30 Illumina NovaSeq 6000 (Homo sapiens)
GSE164264 RNA-seq 6 BGISEQ-500 (Homo sapiens)
C
  GSE30738 		Chip-seq 2 Illumina Genome Analyzer II (Homo sapiens)
GSE262621 RNA-seq 70 Illumina NovaSeq 6000 (Homo sapiens)
GSE128121 RNA-seq 16 Illumina HiSeq 4000 (Homo sapiens)
GSE162914 RNA-seq 211 Illumina HiSeq 2500 (Homo sapiens)
GSE279982 Methylation profiling (Array) 576 Infinium MethylationEPIC
C
  GSE144329 		ATAC-seq 96 NextSeq 550 (Homo sapiens)
GSE205204 RNA-seq 14 Illumina NovaSeq 6000 (Homo sapiens)
GSE125686 RNA-seq 62 Illumina HiSeq 2000 (Homo sapiens);Illumina HiSeq 2500 (Homo sapiens);Illumina NextSeq 500 (Homo sapiens)
C
  GSE220859 		Chip-seq 11 Illumina NovaSeq 6000 (Homo sapiens)
GSE165708 RNA-seq 100 Illumina HiSeq 4000 (Homo sapiens)
C
  GSE211651 		Chip-seq;RNA-seq;PRO-seq 39 Illumina NextSeq 500 (Homo sapiens);Illumina NovaSeq 6000 (Homo sapiens)
GSE68028 MeDIP-chip 1 NimbleGen Human DNA Methylation 2.1M Deluxe Promoter Array [100929_HG19_Deluxe_Prom_Meth_HX1]
C
  GSE100376 		ATAC-seq 24 Illumina NextSeq 500 (Homo sapiens)
GSE167211 RNA-seq 1 Illumina HiSeq 2000 (Homo sapiens)
GSE165132 RNA-seq 56 NextSeq 550 (Homo sapiens)
C
  GSE100266 		ATAC-seq;Chip-seq;RNA-seq 32 Illumina HiSeq 2500 (Homo sapiens)
C
  GSE165703 		ATAC-seq 82 Illumina HiSeq 4000 (Homo sapiens)
GSE246082 RNA-seq 6 Illumina HiSeq 4000 (Homo sapiens)


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE221688 - ERCC6L2 peak across samples

Peak Plot

> Dataset: GSE165705 - ERCC6L2 peak across samples

Peak Plot

> Dataset: GSE30738 - ERCC6L2 peak across samples

Peak Plot

> Dataset: GSE144329 - ERCC6L2 peak across samples

Peak Plot

> Dataset: GSE220859 - ERCC6L2 peak across samples

Peak Plot

> Dataset: GSE211651 - ERCC6L2 peak across samples

Peak Plot

> Dataset: GSE100376 - ERCC6L2 peak across samples

Peak Plot

> Dataset: GSE100266 - ERCC6L2 peak across samples

Peak Plot

> Dataset: GSE165703 - ERCC6L2 peak across samples

Peak Plot