HIV Target gene Detail Information

> FOXK2 Gene Search Result


Gene Information
Gene Name FOXK2
Gene ID 3607
Gene Full Name forkhead box K2
Gene Alias ILF|ILF-1|ILF1|nGTBP
Transcripts ENSG00000141568
Virus HIV
Gene Type protein-coding
HPA Location Info Nucleoplasm;Vesicles, Mitochondria;
Membrane Info Predicted intracellular proteins, Transcription factors
Uniport_ID Q01167
HGNC ID HGNC:6036
OMIM ID 147685
Summary The protein encoded by this gene contains a fork head DNA binding domain. This protein can bind to the purine-rich motifs of the HIV long terminal repeat (LTR), and to the similar purine-rich motif in the interleukin 2 (IL2) promoter. It may be involved in the regulation of viral and cellular promoter elements. [provided by RefSeq, Jul 2008]
Target gene [FOXK2] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
4000073 chr17 775 111 413 1299 View
4000543 chr17 197 56 139 392 View
4000706 chr17 254 34 22 310 View
4002246 chr17 93 10 0 103 View
4002407 chr17 52 42 1 95 View
4002981 chr17 63 10 0 73 View
4003374 chr17 60 3 0 63 View
4003801 chr17 7 3 44 54 View
4004052 chr17 39 10 1 50 View
4004507 chr17 41 2 0 43 View
4005562 chr17 31 0 0 31 View
4007451 chr17 11 8 0 19 View
4007484 chr17 18 1 0 19 View
4008884 chr17 13 0 0 13 View
4010411 chr17 8 1 0 9 View
4012594 chr17 5 0 0 5 View
4015310 chr17 0 1 0 1 View

Target gene [FOXK2] related to Omics data
Data ID Experiment type Sample number Platform
C
  GSE221688 		Chip-seq;scATAC-Seq;scRNA-Seq 12 Illumina NovaSeq 6000 (Homo sapiens)
GSE99737 RNA-seq 9 Illumina HiSeq 2500 (Homo sapiens)
GSE144332 RNA-seq 75 NextSeq 550 (Homo sapiens)
C
  GSE165705 		Chip-seq 30 Illumina NovaSeq 6000 (Homo sapiens)
GSE164264 RNA-seq 6 BGISEQ-500 (Homo sapiens)
GSE262621 RNA-seq 70 Illumina NovaSeq 6000 (Homo sapiens)
GSE128121 RNA-seq 16 Illumina HiSeq 4000 (Homo sapiens)
GSE162914 RNA-seq 211 Illumina HiSeq 2500 (Homo sapiens)
GSE279982 Methylation profiling (Array) 576 Infinium MethylationEPIC
C
  GSE144329 		ATAC-seq 96 NextSeq 550 (Homo sapiens)
GSE205204 RNA-seq 14 Illumina NovaSeq 6000 (Homo sapiens)
GSE125686 RNA-seq 62 Illumina HiSeq 2000 (Homo sapiens);Illumina HiSeq 2500 (Homo sapiens);Illumina NextSeq 500 (Homo sapiens)
GSE198339 scRNA-seq 8 Illumina NovaSeq 6000 (Homo sapiens)
C
  GSE220859 		Chip-seq 11 Illumina NovaSeq 6000 (Homo sapiens)
GSE165708 RNA-seq 100 Illumina HiSeq 4000 (Homo sapiens)
C
  GSE211651 		Chip-seq;RNA-seq;PRO-seq 39 Illumina NextSeq 500 (Homo sapiens);Illumina NovaSeq 6000 (Homo sapiens)
GSE68028 MeDIP-chip 1 NimbleGen Human DNA Methylation 2.1M Deluxe Promoter Array [100929_HG19_Deluxe_Prom_Meth_HX1]
C
  GSE100376 		ATAC-seq 24 Illumina NextSeq 500 (Homo sapiens)
GSE167211 RNA-seq 1 Illumina HiSeq 2000 (Homo sapiens)
GSE165132 RNA-seq 56 NextSeq 550 (Homo sapiens)
C
  GSE100266 		ATAC-seq;Chip-seq;RNA-seq 32 Illumina HiSeq 2500 (Homo sapiens)
C
  GSE165703 		ATAC-seq 82 Illumina HiSeq 4000 (Homo sapiens)
GSE246082 RNA-seq 6 Illumina HiSeq 4000 (Homo sapiens)


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE221688 - FOXK2 peak across samples

Peak Plot

> Dataset: GSE165705 - FOXK2 peak across samples

Peak Plot

> Dataset: GSE144329 - FOXK2 peak across samples

Peak Plot

> Dataset: GSE220859 - FOXK2 peak across samples

Peak Plot

> Dataset: GSE211651 - FOXK2 peak across samples

Peak Plot

> Dataset: GSE100376 - FOXK2 peak across samples

Peak Plot

> Dataset: GSE100266 - FOXK2 peak across samples

Peak Plot

> Dataset: GSE165703 - FOXK2 peak across samples

Peak Plot