HIV Target gene Detail Information

> GBF1 Gene Search Result


Gene Information
Gene Name GBF1
Gene ID 8729
Gene Full Name golgi brefeldin A resistant guanine nucleotide exchange factor 1
Gene Alias ARF1GEF|CMT2GG|CMTDI2|CMTDIA
Transcripts ENSG00000107862
Virus HIV
Gene Type protein-coding
HPA Location Info Golgi apparatus;
Membrane Info Human disease related genes, Plasma proteins, Predicted intracellular proteins
Uniport_ID Q92538
HGNC ID HGNC:4181
OMIM ID 603698
Summary This gene encodes a member of the Sec7 domain family. The encoded protein is a guanine nucleotide exchange factor that regulates the recruitment of proteins to membranes by mediating GDP to GTP exchange. The encoded protein is localized to the Golgi apparatus and plays a role in vesicular trafficking by activating ADP ribosylation factor 1. The encoded protein has also been identified as an important host factor for viral replication. Multiple transcript variants have been observed for this gene. [provided by RefSeq, Dec 2010]
Target gene [GBF1] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
4002039 chr10 27 50 39 116 View
4002461 chr10 67 14 12 93 View
4002979 chr10 11 33 29 73 View
4005091 chr10 2 21 13 36 View
4011554 chr10 6 0 0 6 View
4012193 chr10 4 1 0 5 View
4014101 chr10 1 1 0 2 View

Target gene [GBF1] related to Omics data
Data ID Experiment type Sample number Platform
C
  GSE221688 		Chip-seq;scATAC-Seq;scRNA-Seq 12 Illumina NovaSeq 6000 (Homo sapiens)
GSE99737 RNA-seq 9 Illumina HiSeq 2500 (Homo sapiens)
GSE144332 RNA-seq 75 NextSeq 550 (Homo sapiens)
GSE157829 scRNA-seq 7 Illumina HiSeq 2500 (Homo sapiens)
C
  GSE165705 		Chip-seq 30 Illumina NovaSeq 6000 (Homo sapiens)
GSE164264 RNA-seq 6 BGISEQ-500 (Homo sapiens)
GSE262621 RNA-seq 70 Illumina NovaSeq 6000 (Homo sapiens)
GSE128121 RNA-seq 16 Illumina HiSeq 4000 (Homo sapiens)
GSE162914 RNA-seq 211 Illumina HiSeq 2500 (Homo sapiens)
GSE279982 Methylation profiling (Array) 576 Infinium MethylationEPIC
C
  GSE144329 		ATAC-seq 96 NextSeq 550 (Homo sapiens)
GSE205204 RNA-seq 14 Illumina NovaSeq 6000 (Homo sapiens)
GSE125686 RNA-seq 62 Illumina HiSeq 2000 (Homo sapiens);Illumina HiSeq 2500 (Homo sapiens);Illumina NextSeq 500 (Homo sapiens)
C
  GSE220859 		Chip-seq 11 Illumina NovaSeq 6000 (Homo sapiens)
GSE165708 RNA-seq 100 Illumina HiSeq 4000 (Homo sapiens)
C
  GSE211651 		Chip-seq;RNA-seq;PRO-seq 39 Illumina NextSeq 500 (Homo sapiens);Illumina NovaSeq 6000 (Homo sapiens)
C
  GSE100376 		ATAC-seq 24 Illumina NextSeq 500 (Homo sapiens)
GSE167211 RNA-seq 1 Illumina HiSeq 2000 (Homo sapiens)
GSE165132 RNA-seq 56 NextSeq 550 (Homo sapiens)
C
  GSE100266 		ATAC-seq;Chip-seq;RNA-seq 32 Illumina HiSeq 2500 (Homo sapiens)
C
  GSE165703 		ATAC-seq 82 Illumina HiSeq 4000 (Homo sapiens)
GSE246082 RNA-seq 6 Illumina HiSeq 4000 (Homo sapiens)


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE221688 - GBF1 peak across samples

Peak Plot

> Dataset: GSE165705 - GBF1 peak across samples

Peak Plot

> Dataset: GSE144329 - GBF1 peak across samples

Peak Plot

> Dataset: GSE220859 - GBF1 peak across samples

Peak Plot

> Dataset: GSE211651 - GBF1 peak across samples

Peak Plot

> Dataset: GSE100376 - GBF1 peak across samples

Peak Plot

> Dataset: GSE100266 - GBF1 peak across samples

Peak Plot

> Dataset: GSE165703 - GBF1 peak across samples

Peak Plot