HIV Target gene Detail Information

> ZC3H4 Gene Search Result


Gene Information
Gene Name ZC3H4
Gene ID 23211
Gene Full Name zinc finger CCCH-type containing 4
Gene Alias C19orf7
Transcripts ENSG00000130749
Virus HIV
Gene Type protein-coding
HPA Location Info Nucleoplasm;Cytosol;
Membrane Info Predicted intracellular proteins, Transcription factors
Uniport_ID Q9UPT8
HGNC ID HGNC:17808
OMIM ID 619498
Summary This gene encodes a member of a family of CCCH (C-x8-C-x5-C-x3-H type) zinc finger domain-containing proteins. These zinc finger domains, which coordinate zinc finger binding and are characterized by three cysteine residues and one histidine residue, are nucleic acid-binding. Other family members are known to function in post-transcriptional regulation. [provided by RefSeq, Aug 2011]
Target gene [ZC3H4] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
4000948 chr19 6 192 43 241 View
4001670 chr19 14 70 58 142 View
4001793 chr19 13 61 58 132 View
4002013 chr19 20 40 58 118 View
4002194 chr19 12 37 58 107 View
4002617 chr19 52 34 1 87 View
4006191 chr19 25 1 0 26 View
4007618 chr19 15 3 0 18 View
4009245 chr19 7 5 0 12 View

Target gene [ZC3H4] related to Omics data
Data ID Experiment type Sample number Platform
C
  GSE221688 		Chip-seq;scATAC-Seq;scRNA-Seq 12 Illumina NovaSeq 6000 (Homo sapiens)
GSE99737 RNA-seq 9 Illumina HiSeq 2500 (Homo sapiens)
GSE144332 RNA-seq 75 NextSeq 550 (Homo sapiens)
C
  GSE165705 		Chip-seq 30 Illumina NovaSeq 6000 (Homo sapiens)
GSE164264 RNA-seq 6 BGISEQ-500 (Homo sapiens)
GSE262621 RNA-seq 70 Illumina NovaSeq 6000 (Homo sapiens)
GSE128121 RNA-seq 16 Illumina HiSeq 4000 (Homo sapiens)
GSE162914 RNA-seq 211 Illumina HiSeq 2500 (Homo sapiens)
GSE279982 Methylation profiling (Array) 576 Infinium MethylationEPIC
C
  GSE144329 		ATAC-seq 96 NextSeq 550 (Homo sapiens)
GSE205204 RNA-seq 14 Illumina NovaSeq 6000 (Homo sapiens)
GSE125686 RNA-seq 62 Illumina HiSeq 2000 (Homo sapiens);Illumina HiSeq 2500 (Homo sapiens);Illumina NextSeq 500 (Homo sapiens)
C
  GSE220859 		Chip-seq 11 Illumina NovaSeq 6000 (Homo sapiens)
GSE165708 RNA-seq 100 Illumina HiSeq 4000 (Homo sapiens)
C
  GSE211651 		Chip-seq;RNA-seq;PRO-seq 39 Illumina NextSeq 500 (Homo sapiens);Illumina NovaSeq 6000 (Homo sapiens)
GSE68028 MeDIP-chip 1 NimbleGen Human DNA Methylation 2.1M Deluxe Promoter Array [100929_HG19_Deluxe_Prom_Meth_HX1]
C
  GSE100376 		ATAC-seq 24 Illumina NextSeq 500 (Homo sapiens)
GSE167211 RNA-seq 1 Illumina HiSeq 2000 (Homo sapiens)
GSE165132 RNA-seq 56 NextSeq 550 (Homo sapiens)
C
  GSE100266 		ATAC-seq;Chip-seq;RNA-seq 32 Illumina HiSeq 2500 (Homo sapiens)
C
  GSE165703 		ATAC-seq 82 Illumina HiSeq 4000 (Homo sapiens)
GSE246082 RNA-seq 6 Illumina HiSeq 4000 (Homo sapiens)


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE221688 - ZC3H4 peak across samples

Peak Plot

> Dataset: GSE165705 - ZC3H4 peak across samples

Peak Plot

> Dataset: GSE144329 - ZC3H4 peak across samples

Peak Plot

> Dataset: GSE220859 - ZC3H4 peak across samples

Peak Plot

> Dataset: GSE211651 - ZC3H4 peak across samples

Peak Plot

> Dataset: GSE100376 - ZC3H4 peak across samples

Peak Plot

> Dataset: GSE100266 - ZC3H4 peak across samples

Peak Plot

> Dataset: GSE165703 - ZC3H4 peak across samples

Peak Plot