HIV Target gene Detail Information

> ZGPAT Gene Search Result


Gene Information
Gene Name ZGPAT
Gene ID 84619
Gene Full Name zinc finger CCCH-type and G-patch domain containing
Gene Alias GPATC6|GPATCH6|KIAA1847|ZC3H9|ZC3HDC9|ZIP
Transcripts ENSG00000197114
Virus HIV
Gene Type protein-coding
HPA Location Info Nucleoplasm, Plasma membrane;
Membrane Info Predicted intracellular proteins, Transcription factors
Uniport_ID Q8N5A5
HGNC ID HGNC:15948
OMIM ID 619577
Summary Enables DNA-binding transcription repressor activity, RNA polymerase II-specific and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Involved in negative regulation of epidermal growth factor-activated receptor activity and negative regulation of transcription by RNA polymerase II. Located in nucleoplasm and plasma membrane. [provided by Alliance of Genome Resources, Apr 2025]
Target gene [ZGPAT] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
4000889 chr20 235 15 4 254 View
4000903 chr20 235 17 0 252 View
4000904 chr20 235 17 0 252 View
4001143 chr20 206 0 0 206 View
4001546 chr20 129 20 3 152 View
4001889 chr20 123 1 0 124 View
4001890 chr20 123 1 0 124 View
4002171 chr20 106 2 0 108 View
4002348 chr20 70 27 1 98 View
4002715 chr20 82 0 0 82 View
4003161 chr20 66 2 0 68 View
4003218 chr20 66 0 0 66 View
4003788 chr20 39 13 2 54 View
4004661 chr20 40 1 0 41 View
4005615 chr20 28 3 0 31 View
4005669 chr20 30 0 0 30 View
4006928 chr20 22 0 0 22 View
4008492 chr20 7 6 2 15 View
4008961 chr20 11 2 0 13 View
4009155 chr20 11 1 0 12 View

Target gene [ZGPAT] related to Omics data
Data ID Experiment type Sample number Platform
C
  GSE221688 		Chip-seq;scATAC-Seq;scRNA-Seq 12 Illumina NovaSeq 6000 (Homo sapiens)
GSE99737 RNA-seq 9 Illumina HiSeq 2500 (Homo sapiens)
E
  GSE144332 		RNA-seq 75 NextSeq 550 (Homo sapiens)
GSE164264 RNA-seq 6 BGISEQ-500 (Homo sapiens)
GSE262621 RNA-seq 70 Illumina NovaSeq 6000 (Homo sapiens)
GSE128121 RNA-seq 16 Illumina HiSeq 4000 (Homo sapiens)
GSE162914 RNA-seq 211 Illumina HiSeq 2500 (Homo sapiens)
GSE279982 Methylation profiling (Array) 576 Infinium MethylationEPIC
C
  GSE144329 		ATAC-seq 96 NextSeq 550 (Homo sapiens)
GSE205204 RNA-seq 14 Illumina NovaSeq 6000 (Homo sapiens)
GSE125686 RNA-seq 62 Illumina HiSeq 2000 (Homo sapiens);Illumina HiSeq 2500 (Homo sapiens);Illumina NextSeq 500 (Homo sapiens)
S
  GSE198339 		scRNA-seq 8 Illumina NovaSeq 6000 (Homo sapiens)
C
  GSE220859 		Chip-seq 11 Illumina NovaSeq 6000 (Homo sapiens)
GSE165708 RNA-seq 100 Illumina HiSeq 4000 (Homo sapiens)
C
  GSE211651 		Chip-seq;RNA-seq;PRO-seq 39 Illumina NextSeq 500 (Homo sapiens);Illumina NovaSeq 6000 (Homo sapiens)
GSE68028 MeDIP-chip 1 NimbleGen Human DNA Methylation 2.1M Deluxe Promoter Array [100929_HG19_Deluxe_Prom_Meth_HX1]
GSE167211 RNA-seq 1 Illumina HiSeq 2000 (Homo sapiens)
GSE165132 RNA-seq 56 NextSeq 550 (Homo sapiens)
C
  GSE100266 		ATAC-seq;Chip-seq;RNA-seq 32 Illumina HiSeq 2500 (Homo sapiens)
GSE246082 RNA-seq 6 Illumina HiSeq 4000 (Homo sapiens)


When the query gene is differentially changed in the dataset, a volcano/bar plot will be displayed.


> Dataset: GSE144332 - ZGPAT expression across samples

Volcano Plot

Bar Plot