HIV Target gene Detail Information

> MARK2 Gene Search Result


Gene Information
Gene Name MARK2
Gene ID 2011
Gene Full Name microtubule affinity regulating kinase 2
Gene Alias EMK-1|EMK1|PAR-1|Par-1b|Par1b
Transcripts ENSG00000072518
Virus HIV
Gene Type protein-coding
HPA Location Info Plasma membrane;Nucleoplasm;
Membrane Info Enzymes, Predicted intracellular proteins
Uniport_ID Q7KZI7
HGNC ID HGNC:3332
OMIM ID 600526
Summary This gene encodes a member of the Par-1 family of serine/threonine protein kinases. The protein is an important regulator of cell polarity in epithelial and neuronal cells, and also controls the stability of microtubules through phosphorylation and inactivation of several microtubule-associating proteins. The protein localizes to cell membranes. Multiple transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, Jul 2009]
Target gene [MARK2] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
4000223 chr11 352 253 94 699 View
4000401 chr11 32 260 199 491 View
4002174 chr11 76 7 25 108 View
4002809 chr11 79 0 0 79 View
4003578 chr11 31 25 2 58 View
4004514 chr11 32 2 9 43 View
4005450 chr11 31 0 1 32 View
4005688 chr11 30 0 0 30 View
4005732 chr11 5 12 13 30 View
4007395 chr11 7 2 10 19 View
4009518 chr11 10 1 0 11 View
4009642 chr11 3 5 3 11 View
4010173 chr11 8 1 0 9 View
4015736 chr11 0 1 0 1 View

Target gene [MARK2] related to Omics data
Data ID Experiment type Sample number Platform
C
  GSE221688
Chip-seq;scATAC-Seq;scRNA-Seq 12 Illumina NovaSeq 6000 (Homo sapiens)
GSE99737 RNA-seq 9 Illumina HiSeq 2500 (Homo sapiens)
GSE144332 RNA-seq 75 NextSeq 550 (Homo sapiens)
C
  GSE165705
Chip-seq 30 Illumina NovaSeq 6000 (Homo sapiens)
GSE164264 RNA-seq 6 BGISEQ-500 (Homo sapiens)
GSE262621 RNA-seq 70 Illumina NovaSeq 6000 (Homo sapiens)
GSE128121 RNA-seq 16 Illumina HiSeq 4000 (Homo sapiens)
GSE162914 RNA-seq 211 Illumina HiSeq 2500 (Homo sapiens)
GSE279982 Methylation profiling (Array) 576 Infinium MethylationEPIC
C
  GSE144329
ATAC-seq 96 NextSeq 550 (Homo sapiens)
GSE205204 RNA-seq 14 Illumina NovaSeq 6000 (Homo sapiens)
GSE125686 RNA-seq 62 Illumina HiSeq 2000 (Homo sapiens);Illumina HiSeq 2500 (Homo sapiens);Illumina NextSeq 500 (Homo sapiens)
GSE198339 scRNA-seq 8 Illumina NovaSeq 6000 (Homo sapiens)
GSE233747 scRNA-seq 40 Illumina NovaSeq 6000 (Homo sapiens)
C
  GSE220859
Chip-seq 11 Illumina NovaSeq 6000 (Homo sapiens)
GSE165708 RNA-seq 100 Illumina HiSeq 4000 (Homo sapiens)
C
  GSE211651
Chip-seq;RNA-seq;PRO-seq 39 Illumina NextSeq 500 (Homo sapiens);Illumina NovaSeq 6000 (Homo sapiens)
GSE68028 MeDIP-chip 1 NimbleGen Human DNA Methylation 2.1M Deluxe Promoter Array [100929_HG19_Deluxe_Prom_Meth_HX1]
C
  GSE100376
ATAC-seq 24 Illumina NextSeq 500 (Homo sapiens)
GSE167211 RNA-seq 1 Illumina HiSeq 2000 (Homo sapiens)
GSE165132 RNA-seq 56 NextSeq 550 (Homo sapiens)
C
  GSE100266
ATAC-seq;Chip-seq;RNA-seq 32 Illumina HiSeq 2500 (Homo sapiens)
C
  GSE165703
ATAC-seq 82 Illumina HiSeq 4000 (Homo sapiens)
GSE246082 RNA-seq 6 Illumina HiSeq 4000 (Homo sapiens)


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE221688 - MARK2 peak across samples

Peak Plot


> Dataset: GSE165705 - MARK2 peak across samples

Peak Plot


> Dataset: GSE144329 - MARK2 peak across samples

Peak Plot


> Dataset: GSE220859 - MARK2 peak across samples

Peak Plot


> Dataset: GSE211651 - MARK2 peak across samples

Peak Plot


> Dataset: GSE100376 - MARK2 peak across samples

Peak Plot


> Dataset: GSE100266 - MARK2 peak across samples

Peak Plot


> Dataset: GSE165703 - MARK2 peak across samples

Peak Plot