HIV Target gene Detail Information

> SMURF2 Gene Search Result


Gene Information
Gene Name SMURF2
Gene ID 64750
Gene Full Name SMAD specific E3 ubiquitin protein ligase 2
Gene Alias -
Transcripts ENSG00000108854
Virus HIV
Gene Type protein-coding
HPA Location Info Nuclear speckles;
Membrane Info Enzymes, Metabolic proteins, Predicted intracellular proteins
Uniport_ID Q9HAU4
HGNC ID HGNC:16809
OMIM ID 605532
Summary Enables SMAD binding activity; identical protein binding activity; and ubiquitin protein ligase activity. Involved in negative regulation of transforming growth factor beta receptor signaling pathway; positive regulation of trophoblast cell migration; and ubiquitin-dependent protein catabolic process. Located in nuclear speck. Part of ubiquitin ligase complex. [provided by Alliance of Genome Resources, Apr 2025]
Target gene [SMURF2] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
4001497 chr17 118 34 5 157 View
4002613 chr17 67 12 8 87 View
4003201 chr17 26 3 38 67 View
4004119 chr17 48 1 0 49 View
4004235 chr17 5 38 4 47 View
4006048 chr17 4 6 17 27 View
4009455 chr17 9 0 2 11 View
4010204 chr17 9 0 0 9 View
4010301 chr17 6 3 0 9 View
4012920 chr17 4 0 0 4 View
4013251 chr17 3 1 0 4 View

Target gene [SMURF2] related to Omics data
Data ID Experiment type Sample number Platform
C
  GSE221688 		Chip-seq;scATAC-Seq;scRNA-Seq 12 Illumina NovaSeq 6000 (Homo sapiens)
GSE99737 RNA-seq 9 Illumina HiSeq 2500 (Homo sapiens)
GSE144332 RNA-seq 75 NextSeq 550 (Homo sapiens)
C
  GSE165705 		Chip-seq 30 Illumina NovaSeq 6000 (Homo sapiens)
GSE164264 RNA-seq 6 BGISEQ-500 (Homo sapiens)
C
  GSE30738 		Chip-seq 2 Illumina Genome Analyzer II (Homo sapiens)
GSE262621 RNA-seq 70 Illumina NovaSeq 6000 (Homo sapiens)
GSE128121 RNA-seq 16 Illumina HiSeq 4000 (Homo sapiens)
GSE162914 RNA-seq 211 Illumina HiSeq 2500 (Homo sapiens)
GSE279982 Methylation profiling (Array) 576 Infinium MethylationEPIC
C
  GSE144329 		ATAC-seq 96 NextSeq 550 (Homo sapiens)
GSE205204 RNA-seq 14 Illumina NovaSeq 6000 (Homo sapiens)
GSE125686 RNA-seq 62 Illumina HiSeq 2000 (Homo sapiens);Illumina HiSeq 2500 (Homo sapiens);Illumina NextSeq 500 (Homo sapiens)
C
  GSE220859 		Chip-seq 11 Illumina NovaSeq 6000 (Homo sapiens)
GSE165708 RNA-seq 100 Illumina HiSeq 4000 (Homo sapiens)
C
  GSE211651 		Chip-seq;RNA-seq;PRO-seq 39 Illumina NextSeq 500 (Homo sapiens);Illumina NovaSeq 6000 (Homo sapiens)
GSE68028 MeDIP-chip 1 NimbleGen Human DNA Methylation 2.1M Deluxe Promoter Array [100929_HG19_Deluxe_Prom_Meth_HX1]
C
  GSE100376 		ATAC-seq 24 Illumina NextSeq 500 (Homo sapiens)
GSE167211 RNA-seq 1 Illumina HiSeq 2000 (Homo sapiens)
GSE165132 RNA-seq 56 NextSeq 550 (Homo sapiens)
C
  GSE100266 		ATAC-seq;Chip-seq;RNA-seq 32 Illumina HiSeq 2500 (Homo sapiens)
C
  GSE165703 		ATAC-seq 82 Illumina HiSeq 4000 (Homo sapiens)
GSE246082 RNA-seq 6 Illumina HiSeq 4000 (Homo sapiens)


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE221688 - SMURF2 peak across samples

Peak Plot

> Dataset: GSE165705 - SMURF2 peak across samples

Peak Plot

> Dataset: GSE30738 - SMURF2 peak across samples

Peak Plot

> Dataset: GSE144329 - SMURF2 peak across samples

Peak Plot

> Dataset: GSE220859 - SMURF2 peak across samples

Peak Plot

> Dataset: GSE211651 - SMURF2 peak across samples

Peak Plot

> Dataset: GSE100376 - SMURF2 peak across samples

Peak Plot

> Dataset: GSE100266 - SMURF2 peak across samples

Peak Plot

> Dataset: GSE165703 - SMURF2 peak across samples

Peak Plot