HIV Target gene Detail Information

> XPO6 Gene Search Result


Gene Information
Gene Name XPO6
Gene ID 23214
Gene Full Name exportin 6
Gene Alias EXP6|RANBP20
Transcripts ENSG00000169180
Virus HIV
Gene Type protein-coding
HPA Location Info Nucleoplasm, Nucleoli;Plasma membrane, Cytosol;
Membrane Info Metabolic proteins, Predicted intracellular proteins
Uniport_ID Q96QU8
HGNC ID HGNC:19733
OMIM ID 608411
Summary The protein encoded by this gene is a member of the importin-beta family. Members of this family are regulated by the GTPase Ran to mediate transport of cargo across the nuclear envelope. This protein has been shown to mediate nuclear export of profilin-actin complexes. A pseudogene of this gene is located on the long arm of chromosome 14. Alternative splicing results in multiple transcript variants that encode different protein isoforms. [provided by RefSeq, Aug 2012]
Target gene [XPO6] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
4000631 chr16 288 21 28 337 View
4001180 chr16 45 55 99 199 View
4001197 chr16 170 17 9 196 View
4001346 chr16 14 145 16 175 View
4001488 chr16 112 43 3 158 View
4001593 chr16 120 24 4 148 View
4003185 chr16 65 2 0 67 View
4003553 chr16 23 5 31 59 View
4004279 chr16 41 5 0 46 View
4004437 chr16 43 1 0 44 View
4005508 chr16 25 3 4 32 View
4005664 chr16 29 1 0 30 View
4005843 chr16 11 12 6 29 View
4005976 chr16 8 20 0 28 View
4007320 chr16 5 15 0 20 View
4007607 chr16 18 0 0 18 View
4007709 chr16 17 1 0 18 View
4007843 chr16 11 5 1 17 View
4008333 chr16 7 8 0 15 View
4008372 chr16 6 9 0 15 View
4008855 chr16 2 11 0 13 View
4009141 chr16 12 0 0 12 View
4009327 chr16 3 6 3 12 View
4009818 chr16 5 5 0 10 View
4010038 chr16 6 3 1 10 View
4011369 chr16 4 3 0 7 View
4012069 chr16 3 2 0 5 View
4012625 chr16 4 0 0 4 View
4013247 chr16 4 0 0 4 View
4015048 chr16 0 1 0 1 View
4015293 chr16 1 0 0 1 View
4016795 chr16 20 54 176 250 View
4016820 chr16 5 3 1 9 View

Target gene [XPO6] related to Omics data
Data ID Experiment type Sample number Platform
C
  GSE221688
Chip-seq;scATAC-Seq;scRNA-Seq 12 Illumina NovaSeq 6000 (Homo sapiens)
GSE99737 RNA-seq 9 Illumina HiSeq 2500 (Homo sapiens)
GSE144332 RNA-seq 75 NextSeq 550 (Homo sapiens)
GSE205320 scRNA-seq 5 Illumina NovaSeq 6000 (Homo sapiens)
C
  GSE165705
Chip-seq 30 Illumina NovaSeq 6000 (Homo sapiens)
GSE164264 RNA-seq 6 BGISEQ-500 (Homo sapiens)
C
  GSE30738
Chip-seq 2 Illumina Genome Analyzer II (Homo sapiens)
GSE262621 RNA-seq 70 Illumina NovaSeq 6000 (Homo sapiens)
GSE128121 RNA-seq 16 Illumina HiSeq 4000 (Homo sapiens)
GSE162914 RNA-seq 211 Illumina HiSeq 2500 (Homo sapiens)
GSE279982 Methylation profiling (Array) 576 Infinium MethylationEPIC
C
  GSE144329
ATAC-seq 96 NextSeq 550 (Homo sapiens)
GSE205204 RNA-seq 14 Illumina NovaSeq 6000 (Homo sapiens)
GSE125686 RNA-seq 62 Illumina HiSeq 2000 (Homo sapiens);Illumina HiSeq 2500 (Homo sapiens);Illumina NextSeq 500 (Homo sapiens)
GSE198339 scRNA-seq 8 Illumina NovaSeq 6000 (Homo sapiens)
C
  GSE220859
Chip-seq 11 Illumina NovaSeq 6000 (Homo sapiens)
GSE165708 RNA-seq 100 Illumina HiSeq 4000 (Homo sapiens)
C
  GSE211651
Chip-seq;RNA-seq;PRO-seq 39 Illumina NextSeq 500 (Homo sapiens);Illumina NovaSeq 6000 (Homo sapiens)
GSE68028 MeDIP-chip 1 NimbleGen Human DNA Methylation 2.1M Deluxe Promoter Array [100929_HG19_Deluxe_Prom_Meth_HX1]
C
  GSE100376
ATAC-seq 24 Illumina NextSeq 500 (Homo sapiens)
GSE167211 RNA-seq 1 Illumina HiSeq 2000 (Homo sapiens)
GSE165132 RNA-seq 56 NextSeq 550 (Homo sapiens)
C
  GSE100266
ATAC-seq;Chip-seq;RNA-seq 32 Illumina HiSeq 2500 (Homo sapiens)
C
  GSE165703
ATAC-seq 82 Illumina HiSeq 4000 (Homo sapiens)
GSE246082 RNA-seq 6 Illumina HiSeq 4000 (Homo sapiens)


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE221688 - XPO6 peak across samples

Peak Plot


> Dataset: GSE165705 - XPO6 peak across samples

Peak Plot


> Dataset: GSE30738 - XPO6 peak across samples

Peak Plot


> Dataset: GSE144329 - XPO6 peak across samples

Peak Plot


> Dataset: GSE220859 - XPO6 peak across samples

Peak Plot


> Dataset: GSE211651 - XPO6 peak across samples

Peak Plot


> Dataset: GSE100376 - XPO6 peak across samples

Peak Plot


> Dataset: GSE100266 - XPO6 peak across samples

Peak Plot


> Dataset: GSE165703 - XPO6 peak across samples

Peak Plot