HIV Target gene Detail Information

> DIP2B Gene Search Result


Gene Information
Gene Name DIP2B
Gene ID 57609
Gene Full Name disco interacting protein 2 homolog B
Gene Alias -
Transcripts ENSG00000066084
Virus HIV
Gene Type protein-coding
HPA Location Info Endoplasmic reticulum;
Membrane Info Human disease related genes, Predicted intracellular proteins
Uniport_ID Q9P265
HGNC ID HGNC:29284
OMIM ID 611379
Summary This gene encodes a member of the disco-interacting protein homolog 2 protein family. The encoded protein contains a binding site for the transcriptional regulator DNA methyltransferase 1 associated protein 1 as well as AMP-binding sites. The presence of these sites suggests that the encoded protein may participate in DNA methylation. This gene is located near a folate-sensitive fragile site, and CGG-repeat expansion in the promoter of this gene which affects transcription has been detected in individuals containing this fragile site on chromosome 12. [provided by RefSeq, Aug 2011]
Target gene [DIP2B] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
4000323 chr12 20 302 218 540 View
4000561 chr12 23 221 126 370 View
4000782 chr12 8 263 12 283 View
4002624 chr12 79 7 0 86 View
4002772 chr12 70 10 0 80 View
4004714 chr12 39 0 1 40 View
4006431 chr12 17 7 1 25 View
4007900 chr12 14 3 0 17 View
4008326 chr12 14 1 0 15 View
4009806 chr12 7 3 0 10 View
4010552 chr12 8 0 0 8 View
4012051 chr12 3 2 0 5 View

Target gene [DIP2B] related to Omics data
Data ID Experiment type Sample number Platform
C
  GSE221688
Chip-seq;scATAC-Seq;scRNA-Seq 12 Illumina NovaSeq 6000 (Homo sapiens)
GSE99737 RNA-seq 9 Illumina HiSeq 2500 (Homo sapiens)
GSE144332 RNA-seq 75 NextSeq 550 (Homo sapiens)
C
  GSE165705
Chip-seq 30 Illumina NovaSeq 6000 (Homo sapiens)
GSE164264 RNA-seq 6 BGISEQ-500 (Homo sapiens)
C
  GSE30738
Chip-seq 2 Illumina Genome Analyzer II (Homo sapiens)
GSE262621 RNA-seq 70 Illumina NovaSeq 6000 (Homo sapiens)
GSE128121 RNA-seq 16 Illumina HiSeq 4000 (Homo sapiens)
GSE162914 RNA-seq 211 Illumina HiSeq 2500 (Homo sapiens)
GSE279982 Methylation profiling (Array) 576 Infinium MethylationEPIC
C
  GSE144329
ATAC-seq 96 NextSeq 550 (Homo sapiens)
GSE205204 RNA-seq 14 Illumina NovaSeq 6000 (Homo sapiens)
GSE125686 RNA-seq 62 Illumina HiSeq 2000 (Homo sapiens);Illumina HiSeq 2500 (Homo sapiens);Illumina NextSeq 500 (Homo sapiens)
GSE233747 scRNA-seq 40 Illumina NovaSeq 6000 (Homo sapiens)
C
  GSE220859
Chip-seq 11 Illumina NovaSeq 6000 (Homo sapiens)
GSE165708 RNA-seq 100 Illumina HiSeq 4000 (Homo sapiens)
C
  GSE211651
Chip-seq;RNA-seq;PRO-seq 39 Illumina NextSeq 500 (Homo sapiens);Illumina NovaSeq 6000 (Homo sapiens)
GSE68028 MeDIP-chip 1 NimbleGen Human DNA Methylation 2.1M Deluxe Promoter Array [100929_HG19_Deluxe_Prom_Meth_HX1]
C
  GSE100376
ATAC-seq 24 Illumina NextSeq 500 (Homo sapiens)
GSE167211 RNA-seq 1 Illumina HiSeq 2000 (Homo sapiens)
GSE165132 RNA-seq 56 NextSeq 550 (Homo sapiens)
C
  GSE100266
ATAC-seq;Chip-seq;RNA-seq 32 Illumina HiSeq 2500 (Homo sapiens)
C
  GSE165703
ATAC-seq 82 Illumina HiSeq 4000 (Homo sapiens)
GSE246082 RNA-seq 6 Illumina HiSeq 4000 (Homo sapiens)


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE221688 - DIP2B peak across samples

Peak Plot


> Dataset: GSE165705 - DIP2B peak across samples

Peak Plot


> Dataset: GSE30738 - DIP2B peak across samples

Peak Plot


> Dataset: GSE144329 - DIP2B peak across samples

Peak Plot


> Dataset: GSE220859 - DIP2B peak across samples

Peak Plot


> Dataset: GSE211651 - DIP2B peak across samples

Peak Plot


> Dataset: GSE100376 - DIP2B peak across samples

Peak Plot


> Dataset: GSE100266 - DIP2B peak across samples

Peak Plot


> Dataset: GSE165703 - DIP2B peak across samples

Peak Plot