HIV Target gene Detail Information

> FOXJ3 Gene Search Result


Gene Information
Gene Name FOXJ3
Gene ID 22887
Gene Full Name forkhead box J3
Gene Alias -
Transcripts ENSG00000198815
Virus HIV
Gene Type protein-coding
HPA Location Info Nucleoplasm, Nuclear speckles;Vesicles;
Membrane Info Predicted intracellular proteins, Transcription factors
Uniport_ID Q9UPW0
HGNC ID HGNC:29178
OMIM ID 616035
Summary Enables DNA-binding transcription activator activity, RNA polymerase II-specific and sequence-specific double-stranded DNA binding activity. Involved in positive regulation of transcription by RNA polymerase II. Predicted to be located in chromatin. Predicted to be active in nucleus. [provided by Alliance of Genome Resources, Apr 2025]
Target gene [FOXJ3] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
4001523 chr1 84 27 43 154 View
4001866 chr1 86 32 8 126 View
4001976 chr1 84 16 19 119 View
4002734 chr1 46 30 6 82 View
4003762 chr1 47 8 0 55 View
4005657 chr1 22 2 6 30 View
4010540 chr1 8 0 0 8 View
4015495 chr1 1 0 0 1 View

Target gene [FOXJ3] related to Omics data
Data ID Experiment type Sample number Platform
C
  GSE221688 		Chip-seq;scATAC-Seq;scRNA-Seq 12 Illumina NovaSeq 6000 (Homo sapiens)
GSE99737 RNA-seq 9 Illumina HiSeq 2500 (Homo sapiens)
GSE144332 RNA-seq 75 NextSeq 550 (Homo sapiens)
C
  GSE165705 		Chip-seq 30 Illumina NovaSeq 6000 (Homo sapiens)
GSE164264 RNA-seq 6 BGISEQ-500 (Homo sapiens)
C
  GSE30738 		Chip-seq 2 Illumina Genome Analyzer II (Homo sapiens)
GSE262621 RNA-seq 70 Illumina NovaSeq 6000 (Homo sapiens)
GSE128121 RNA-seq 16 Illumina HiSeq 4000 (Homo sapiens)
GSE162914 RNA-seq 211 Illumina HiSeq 2500 (Homo sapiens)
GSE187515 scRNA-seq 104 Illumina MiSeq (Homo sapiens);Illumina HiSeq 4000 (Homo sapiens);Illumina NovaSeq 6000 (Homo sapiens)
GSE279982 Methylation profiling (Array) 576 Infinium MethylationEPIC
C
  GSE144329 		ATAC-seq 96 NextSeq 550 (Homo sapiens)
GSE205204 RNA-seq 14 Illumina NovaSeq 6000 (Homo sapiens)
GSE125686 RNA-seq 62 Illumina HiSeq 2000 (Homo sapiens);Illumina HiSeq 2500 (Homo sapiens);Illumina NextSeq 500 (Homo sapiens)
C
  GSE220859 		Chip-seq 11 Illumina NovaSeq 6000 (Homo sapiens)
GSE165708 RNA-seq 100 Illumina HiSeq 4000 (Homo sapiens)
C
  GSE211651 		Chip-seq;RNA-seq;PRO-seq 39 Illumina NextSeq 500 (Homo sapiens);Illumina NovaSeq 6000 (Homo sapiens)
GSE198809 scRNA-seq 46 Illumina NovaSeq 6000 (Homo sapiens)
GSE68028 MeDIP-chip 1 NimbleGen Human DNA Methylation 2.1M Deluxe Promoter Array [100929_HG19_Deluxe_Prom_Meth_HX1]
C
  GSE100376 		ATAC-seq 24 Illumina NextSeq 500 (Homo sapiens)
GSE167211 RNA-seq 1 Illumina HiSeq 2000 (Homo sapiens)
GSE165132 RNA-seq 56 NextSeq 550 (Homo sapiens)
C
  GSE100266 		ATAC-seq;Chip-seq;RNA-seq 32 Illumina HiSeq 2500 (Homo sapiens)
C
  GSE165703 		ATAC-seq 82 Illumina HiSeq 4000 (Homo sapiens)
GSE246082 RNA-seq 6 Illumina HiSeq 4000 (Homo sapiens)


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE221688 - FOXJ3 peak across samples

Peak Plot

> Dataset: GSE165705 - FOXJ3 peak across samples

Peak Plot

> Dataset: GSE30738 - FOXJ3 peak across samples

Peak Plot

> Dataset: GSE144329 - FOXJ3 peak across samples

Peak Plot

> Dataset: GSE220859 - FOXJ3 peak across samples

Peak Plot

> Dataset: GSE211651 - FOXJ3 peak across samples

Peak Plot

> Dataset: GSE100376 - FOXJ3 peak across samples

Peak Plot

> Dataset: GSE100266 - FOXJ3 peak across samples

Peak Plot

> Dataset: GSE165703 - FOXJ3 peak across samples

Peak Plot