HIV Target gene Detail Information

> PPP6R3 Gene Search Result


Gene Information
Gene Name PPP6R3
Gene ID 55291
Gene Full Name protein phosphatase 6 regulatory subunit 3
Gene Alias C11orf23|PP6R3|SAP190|SAPL|SAPLa|SAPS3
Transcripts ENSG00000110075
Virus HIV
Gene Type protein-coding
HPA Location Info Nucleoplasm, Plasma membrane, Cytosol;
Membrane Info Predicted intracellular proteins
Uniport_ID Q5H9R7
HGNC ID HGNC:1173
OMIM ID 610879
Summary Protein phosphatase regulatory subunits, such as SAPS3, modulate the activity of protein phosphatase catalytic subunits by restricting substrate specificity, recruiting substrates, and determining the intracellular localization of the holoenzyme. SAPS3 is a regulatory subunit for the protein phosphatase-6 catalytic subunit (PPP6C; MIM 612725) (Stefansson and Brautigan, 2006 [PubMed 16769727]).[supplied by OMIM, Nov 2010]
Target gene [PPP6R3] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
4003257 chr11 4 60 1 65 View
4003505 chr11 27 32 1 60 View
4004600 chr11 25 17 0 42 View
4005050 chr11 9 17 10 36 View
4006866 chr11 21 0 1 22 View
4007990 chr11 15 2 0 17 View
4008395 chr11 7 1 7 15 View
4009295 chr11 12 0 0 12 View
4011353 chr11 5 2 0 7 View
4015501 chr11 0 1 0 1 View

Target gene [PPP6R3] related to Omics data
Data ID Experiment type Sample number Platform
C
  GSE221688 		Chip-seq;scATAC-Seq;scRNA-Seq 12 Illumina NovaSeq 6000 (Homo sapiens)
GSE99737 RNA-seq 9 Illumina HiSeq 2500 (Homo sapiens)
GSE144332 RNA-seq 75 NextSeq 550 (Homo sapiens)
C
  GSE165705 		Chip-seq 30 Illumina NovaSeq 6000 (Homo sapiens)
GSE164264 RNA-seq 6 BGISEQ-500 (Homo sapiens)
C
  GSE30738 		Chip-seq 2 Illumina Genome Analyzer II (Homo sapiens)
GSE262621 RNA-seq 70 Illumina NovaSeq 6000 (Homo sapiens)
GSE128121 RNA-seq 16 Illumina HiSeq 4000 (Homo sapiens)
GSE162914 RNA-seq 211 Illumina HiSeq 2500 (Homo sapiens)
GSE187515 scRNA-seq 104 Illumina MiSeq (Homo sapiens);Illumina HiSeq 4000 (Homo sapiens);Illumina NovaSeq 6000 (Homo sapiens)
GSE279982 Methylation profiling (Array) 576 Infinium MethylationEPIC
C
  GSE144329 		ATAC-seq 96 NextSeq 550 (Homo sapiens)
GSE205204 RNA-seq 14 Illumina NovaSeq 6000 (Homo sapiens)
GSE125686 RNA-seq 62 Illumina HiSeq 2000 (Homo sapiens);Illumina HiSeq 2500 (Homo sapiens);Illumina NextSeq 500 (Homo sapiens)
GSE233747 scRNA-seq 40 Illumina NovaSeq 6000 (Homo sapiens)
C
  GSE220859 		Chip-seq 11 Illumina NovaSeq 6000 (Homo sapiens)
GSE165708 RNA-seq 100 Illumina HiSeq 4000 (Homo sapiens)
C
  GSE211651 		Chip-seq;RNA-seq;PRO-seq 39 Illumina NextSeq 500 (Homo sapiens);Illumina NovaSeq 6000 (Homo sapiens)
GSE68028 MeDIP-chip 1 NimbleGen Human DNA Methylation 2.1M Deluxe Promoter Array [100929_HG19_Deluxe_Prom_Meth_HX1]
C
  GSE100376 		ATAC-seq 24 Illumina NextSeq 500 (Homo sapiens)
GSE167211 RNA-seq 1 Illumina HiSeq 2000 (Homo sapiens)
GSE165132 RNA-seq 56 NextSeq 550 (Homo sapiens)
C
  GSE100266 		ATAC-seq;Chip-seq;RNA-seq 32 Illumina HiSeq 2500 (Homo sapiens)
C
  GSE165703 		ATAC-seq 82 Illumina HiSeq 4000 (Homo sapiens)
GSE246082 RNA-seq 6 Illumina HiSeq 4000 (Homo sapiens)


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE221688 - PPP6R3 peak across samples

Peak Plot

> Dataset: GSE165705 - PPP6R3 peak across samples

Peak Plot

> Dataset: GSE30738 - PPP6R3 peak across samples

Peak Plot

> Dataset: GSE144329 - PPP6R3 peak across samples

Peak Plot

> Dataset: GSE220859 - PPP6R3 peak across samples

Peak Plot

> Dataset: GSE211651 - PPP6R3 peak across samples

Peak Plot

> Dataset: GSE100376 - PPP6R3 peak across samples

Peak Plot

> Dataset: GSE100266 - PPP6R3 peak across samples

Peak Plot

> Dataset: GSE165703 - PPP6R3 peak across samples

Peak Plot