HIV Target gene Detail Information

> SCAPER Gene Search Result


Gene Information
Gene Name SCAPER
Gene ID 49855
Gene Full Name S-phase cyclin A associated protein in the ER
Gene Alias IDDRP|MSTP063|ZNF291|Zfp291
Transcripts ENSG00000140386
Virus HIV
Gene Type protein-coding
HPA Location Info Nuclear speckles;Nucleoplasm, Basal body, Cytosol;
Membrane Info Disease related genes, Human disease related genes, Predicted intracellular proteins
Uniport_ID Q9BY12
HGNC ID HGNC:13081
OMIM ID 611611
Summary Predicted to enable nucleic acid binding activity and zinc ion binding activity. Acts upstream of or within retina development in camera-type eye. Located in cytosol and nuclear speck. [provided by Alliance of Genome Resources, Apr 2025]
Target gene [SCAPER] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
4000933 chr15 22 181 58 261 View
4002160 chr15 97 12 0 109 View
4004436 chr15 16 13 15 44 View
4005268 chr15 33 1 0 34 View
4005822 chr15 25 2 2 29 View
4006184 chr15 18 8 0 26 View
4009537 chr15 9 1 1 11 View
4011052 chr15 7 0 0 7 View
4012232 chr15 5 0 0 5 View
4015972 chr15 0 0 0 0 View

Target gene [SCAPER] related to Omics data
Data ID Experiment type Sample number Platform
C
  GSE221688 		Chip-seq;scATAC-Seq;scRNA-Seq 12 Illumina NovaSeq 6000 (Homo sapiens)
GSE99737 RNA-seq 9 Illumina HiSeq 2500 (Homo sapiens)
GSE144332 RNA-seq 75 NextSeq 550 (Homo sapiens)
GSE157829 scRNA-seq 7 Illumina HiSeq 2500 (Homo sapiens)
C
  GSE165705 		Chip-seq 30 Illumina NovaSeq 6000 (Homo sapiens)
GSE164264 RNA-seq 6 BGISEQ-500 (Homo sapiens)
C
  GSE30738 		Chip-seq 2 Illumina Genome Analyzer II (Homo sapiens)
GSE262621 RNA-seq 70 Illumina NovaSeq 6000 (Homo sapiens)
GSE128121 RNA-seq 16 Illumina HiSeq 4000 (Homo sapiens)
GSE162914 RNA-seq 211 Illumina HiSeq 2500 (Homo sapiens)
GSE187515 scRNA-seq 104 Illumina MiSeq (Homo sapiens);Illumina HiSeq 4000 (Homo sapiens);Illumina NovaSeq 6000 (Homo sapiens)
GSE279982 Methylation profiling (Array) 576 Infinium MethylationEPIC
C
  GSE144329 		ATAC-seq 96 NextSeq 550 (Homo sapiens)
GSE205204 RNA-seq 14 Illumina NovaSeq 6000 (Homo sapiens)
GSE125686 RNA-seq 62 Illumina HiSeq 2000 (Homo sapiens);Illumina HiSeq 2500 (Homo sapiens);Illumina NextSeq 500 (Homo sapiens)
C
  GSE220859 		Chip-seq 11 Illumina NovaSeq 6000 (Homo sapiens)
GSE165708 RNA-seq 100 Illumina HiSeq 4000 (Homo sapiens)
C
  GSE211651 		Chip-seq;RNA-seq;PRO-seq 39 Illumina NextSeq 500 (Homo sapiens);Illumina NovaSeq 6000 (Homo sapiens)
GSE68028 MeDIP-chip 1 NimbleGen Human DNA Methylation 2.1M Deluxe Promoter Array [100929_HG19_Deluxe_Prom_Meth_HX1]
C
  GSE100376 		ATAC-seq 24 Illumina NextSeq 500 (Homo sapiens)
GSE167211 RNA-seq 1 Illumina HiSeq 2000 (Homo sapiens)
GSE165132 RNA-seq 56 NextSeq 550 (Homo sapiens)
C
  GSE100266 		ATAC-seq;Chip-seq;RNA-seq 32 Illumina HiSeq 2500 (Homo sapiens)
C
  GSE165703 		ATAC-seq 82 Illumina HiSeq 4000 (Homo sapiens)
GSE246082 RNA-seq 6 Illumina HiSeq 4000 (Homo sapiens)


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE221688 - SCAPER peak across samples

Peak Plot

> Dataset: GSE165705 - SCAPER peak across samples

Peak Plot

> Dataset: GSE30738 - SCAPER peak across samples

Peak Plot

> Dataset: GSE144329 - SCAPER peak across samples

Peak Plot

> Dataset: GSE220859 - SCAPER peak across samples

Peak Plot

> Dataset: GSE211651 - SCAPER peak across samples

Peak Plot

> Dataset: GSE100376 - SCAPER peak across samples

Peak Plot

> Dataset: GSE100266 - SCAPER peak across samples

Peak Plot

> Dataset: GSE165703 - SCAPER peak across samples

Peak Plot